Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00011 ATGGAAGATTCAGAGGAAGATGAGCTTCTGAATCTTAGCCTTTCAGTTGCTGCTGATAGAGAAAGGAAAAAAAAGGGAAAAAATGTTTCCATGAGTAGTAGTAGTAGTAATGCTAGGAATAAGTCTTCCTCCTATGAAGGCTATGAAGGGAAGATCTTTAGGCTTCTCCAAATGAGGGAGCAGATGCTAAGACAAGACCACAGATCAAGGAAAGGAGTTGTTGAAGATGGAAATGGCCTTCCTTTAATCCACTTGTTACTCACAACTTCCACTTGTGTTGATGAGAACAACTTTGATTCTTCCTTAGAGAATCTCACTGATTTATACCAAACTGTTTCCCTAACAGGTGATTCAGTCCAACGTGTTGTTGCTTATTTTGCTGATGGTTTGGCTGCTAGGCTTCTCACTAAGAAATCCCCTTTCTATGACATGATCATGGAAGAACCAACCATTGAAGAAGAGTTTCTTGCTTTCACAGATCTCTACAGAGTCTCCCCTTACTTTCAATTTGCTCATTTCACTGCAAACCAAGCTATTTTGGAGGCTTTTGAGATGGAAGAAGAGAGGAACAACCGTTCTCTTCATGTCATTGACTTTGATGTCTCTTATGGCTTCCAATGGCCTTCTCTCATTCAATCTCTCTCAGAGAAAGCCACCACTGGAAACAGAATCTCCCTCAGAATAACAGGGTTTGGGAAGAGCCTTAAAGAGCTTCAAGAAACTGAGTCTAGATTGGTTAGTTTCTCAAAGGGATTTGGAAATCTTGTGTTTGAATTCCAAGGTTTGTTAAGAGGCTCAAGGGTTATTAACTTAAGGAAGAAAAAGAATGAGACTGTGGCAGTTAACTTGGTTTCTTATTTGAACACTTTGAGTTGTTTTATGAAGATCTCTGACACATTGGGATTTGTTCATTCTCTTAATCCATCCATTGTTGTGTTGGTGGAGCAAGAAGGAAGTAGGAGTCCTAGAAGCTTCTTGTCAAGATTCACAGACTCTTTGCATTATTTTGCAGCCATGTTTGATTCATTGGATGATTGTCTACCACTTGAGAGCACTGAGAGGTTGAGAATTGAGAAGAAGCTTCTTGGGAAAGAGATCAAAAGCATGCTTAATCATGATCATGTGGATGTGGATTGTCCTAAATATGAGAGGATGGAAACATGGAAAGCAAGGATGGAGAATCATGGGTTTGTTGGAACTAAAATAAGCTCAAAGTCTATAATACAAGCAAAATTGCTTCTCAAGATGAGGACTCATTATTGTCCACTTCAATTTGAAGAAGAAGGAGGTGGTGGTTTCAGGGTTTCTGAAAGAGATGAAGGAAGGGCTATCTCTTTAGGGTGGCAAAATAGGTTTCTCCTTACAGTTTCAGCATGGCAACCAGTATGA 1389 0.3974 MEDSEEDELLNLSLSVAADRERKKKGKNVSMSSSSSNARNKSSSYEGYEGKIFRLLQMREQMLRQDHRSRKGVVEDGNGLPLIHLLLTTSTCVDENNFDSSLENLTDLYQTVSLTGDSVQRVVAYFADGLAARLLTKKSPFYDMIMEEPTIEEEFLAFTDLYRVSPYFQFAHFTANQAILEAFEMEEERNNRSLHVIDFDVSYGFQWPSLIQSLSEKATTGNRISLRITGFGKSLKELQETESRLVSFSKGFGNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRSFLSRFTDSLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNHDHVDVDCPKYERMETWKARMENHGFVGTKISSKSIIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQPV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00011 462 ProSiteProfiles GRAS family profile. 73 460 IPR005202 -
Sebi85g00011 462 MobiDBLite consensus disorder prediction 29 44 - -
Sebi85g00011 462 MobiDBLite consensus disorder prediction 20 44 - -
Sebi85g00011 462 Pfam GRAS domain family 82 460 IPR005202 -
Sebi85g00011 462 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 61 455 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi85g00011 Sebi-Chr85 219400 220788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00011 92 461 GRAS Transcription Factor Family AT3G54220 34.293 6.61e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi85g00011 GRAS 2.2e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00011 - - gmx:100809458 791.186