Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00003 ATGGGAGAGAGGTTGCTAAAAAGGGTGAGAGAATTTTTGCTAGAAAAGGTGCTACCTTTTGAGGTAGGATGGTTTGACCAAGAGGAGAACACAAGTGCAGCAATTTGTGCACGTTTGGAAACTGAAGCCAACTTGGTTAGATCCCTAGATGCAGAAAGAATTTCATTGTTAGTTCAGATTTCTGTCACAGCTACACTAGTTTTTGTACTTGGTTTAATTGTTTCATGGAGGGTGACTATTGTCATGATTGGTATGCAGCCTTTGATCATTGCATGTTTATACTCAAAAAGCATTCTCATGAAAAGTATGTCAAGCAAAGCAAGAAGTGCTCAAAGAGAGGGTAGTCAATTAGCAATGGAAGCTACTATTAACCATAGGACTATAACTGCATTCTCATCTGAGAAAAGGATGCTAAATCTGTTCACAACTGCTATGGAGGGCCCCAAGAAGGAAAGCATCAAGCAATCATGGATTTCAGATACAGGAAGCATGACATCTGACATAGCTAAAAGTGGAAGAGCTATGAATTCAGTATTTGCAATACTTGATAGGAAAAAAATGCCTACTGGCCACCTTCACCTGGCTACTGGCCAAGTTCCAAATTCAGGTCTGAATCTGATCAACTTAAATGCTTTCTCTTTCAGTTACATATATATCATTGAAAAATTTAACCAACCTTCCACTGCTTTTTTTCTGGTCAGAGAAGAAAGCAAGATCACAAGAGCAATGTCCAAGGCGTACGATCCTCCAACTGGTTATGACATTCCTTATTTCAGACCCACAATGGATGAAACTGTACGTGGGCAGGTTCTGTCACCATCTCAGGATGTATAA 834 0.3981 MGERLLKRVREFLLEKVLPFEVGWFDQEENTSAAICARLETEANLVRSLDAERISLLVQISVTATLVFVLGLIVSWRVTIVMIGMQPLIIACLYSKSILMKSMSSKARSAQREGSQLAMEATINHRTITAFSSEKRMLNLFTTAMEGPKKESIKQSWISDTGSMTSDIAKSGRAMNSVFAILDRKKMPTGHLHLATGQVPNSGLNLINLNAFSFSYIYIIEKFNQPSTAFFLVREESKITRAMSKAYDPPTGYDIPYFRPTMDETVRGQVLSPSQDV 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00003 277 Gene3D ABC transporter type 1, transmembrane domain 1 187 IPR036640 GO:0005524|GO:0016020
Sebi85g00003 277 Pfam ABC transporter transmembrane region 1 164 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi85g00003 277 SUPERFAMILY ABC transporter transmembrane region 1 168 IPR036640 GO:0005524|GO:0016020
Sebi85g00003 277 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 160 IPR039421 -
Sebi85g00003 277 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 158 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi85g00003 Sebi-Chr85 86252 87939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00003 1 185 Calmodulin-binding Proteins AT2G36910 32.203 1.08e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00003 K05658 - gmx:100804664 249.595