Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi859g00015 ATGAACGTCGCCAGCGGCAGTGGAACGCGGTGGAAATCCGTTCCGTTCAACCATCCGGCGACGTTCGAGACCATGGCGATGGAATTAGATCTCAAGAACAAGATAAAATCGGACCTCGAATTGTTCCTCAAGGCGAAGCAATACTACCGGCGGCTCGGCCGTGCGTGGAAACGGAGCTTCCTTTTGTACGGTCCCTCTGGCACTGGAAAATCGAGCTTTGTCGCCGCCATGGCTAATTTCCTCTGTTACGACGTGTACGACGTGGACCTCTCCAAGGTTCGCGGCGATTCAGATCTGAAGTTTCTCCTCCTCGAAACAACGGCGAAATCGATCATTGTCGTGGAGGATCTCGACCGGTTTCTGGCAGGGGAATCGCAATCGGCGTCGTTAACGGCATCGGGGGTCCAGAACTTCATGGACGGGATTCTGAGCTCTTGTTGCGGCGAAGAGAGGATCATGGTGTTCACGATGAACAGCAAGGAGTGTATTGACCCGAACCTGCTACGTCCGGGTCGGGTCGACGTGCACATCCATTTTCCGGTGTGCGATTTCTCGGCGTTCAAGACGCTGGCGAGTAGCTACCTTGGGGTGAAGGAGCACAAGCTGTTCCCGCAGGTGGAGGAGATTTTCCGGCAGGGCGCGAGTCTCAGCCCCGCGGAGATCAGCGAGTTGATGATCGCGAATCGGAACTCGCCGAGTCGGGCCATCAAATCGGTTATCGGGGCGCTCCAAACGGACGGTGATGGGAGGGGGTGCGGGGATGTGATCGGACGGCAGATGGGAGACGATGACGTGGATGAAGGGCCCGAAGGGGTGCTGTGTGGTGGTGAGGGTTTCACTACGGTTAAGGATTTACGGAAGTTGTACGGTTTCTTCAGATTGCGGAACGCCAAAAGATCTCGCTCGTCTAATTGCTTGGTCAATGAAAGATAA 933 0.5552 MNVASGSGTRWKSVPFNHPATFETMAMELDLKNKIKSDLELFLKAKQYYRRLGRAWKRSFLLYGPSGTGKSSFVAAMANFLCYDVYDVDLSKVRGDSDLKFLLLETTAKSIIVVEDLDRFLAGESQSASLTASGVQNFMDGILSSCCGEERIMVFTMNSKECIDPNLLRPGRVDVHIHFPVCDFSAFKTLASSYLGVKEHKLFPQVEEIFRQGASLSPAEISELMIANRNSPSRAIKSVIGALQTDGDGRGCGDVIGRQMGDDDVDEGPEGVLCGGEGFTTVKDLRKLYGFFRLRNAKRSRSSNCLVNER 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi859g00015 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 238 IPR027417 -
Sebi859g00015 310 Pfam ATPase family associated with various cellular activities (AAA) 61 180 IPR003959 GO:0005524|GO:0016887
Sebi859g00015 310 Gene3D - 11 178 IPR027417 -
Sebi859g00015 310 SMART AAA_5 56 183 IPR003593 GO:0016887
Sebi859g00015 310 Gene3D - 179 241 - -
Sebi859g00015 310 PANTHER BCS1 AAA-TYPE ATPASE 10 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi859g00015 Sebi-Chr859 207216 208148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi859g00015 52 181 Calmodulin-binding Proteins AT3G56690 28.671 1.24e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi859g00015 - K08900 gmx:100787809 492.271