Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi859g00006 ATGAACCTCATGTCCTCACTTGCACACCACCGTATTGCTGCGGCGGCAAAAGCATGCAACGCCACCAGGCTCATGGCTTTCAGCCTCGGTGACACACGTGCCATAGTCACGTGCCACCCAGACGTTGCCAAAGAGATTCTCAACAGCTCCGTCTTCGCTGATCGTCCTATCAAGGAATCTGCTTATAGTCTCATGTTCAACCGCGCCATCGGGTTCGCCCCTTACGGTGTTTACTGGCGAACCTTGCGAAAGATCGCCACCAAGCACCTCTTCTCTCCCATGCAAATCAAGTCCTCGGAGATTCAGCGCTCCGAAATCGCCAACCAGATGGTCCACATGTTTAGAAACCGCCTTCCTTCTCCTACTCCTACCAGTGGCGGTTTCACCGTACGCGGGGTTCTCAAGAAAGCCTCGCTGAATAACATGATGTGGTCCGTGTTTGGACAGAGGTATAAGCTAAACGAGGCAAACAAGGGAATGGAGGAGCTGCGTGGGTTAGTGGAACAAGGGTATGACCTTTTGGGTACCCTTAATTGGGGTGACCACCTCCCTTTCCTTAAGGACTTTGACGCCCAAAAAATCCGGTCCACCTGCTCTAAACTCGTTCCTAAAGTGAACCGGTTCGTCGGTTCAATCATCGCCGACCACCGAGCCGACAAAACCCAAACCAACCGGGATTTCGTTCATGTCTTGCTCTCTCTTCAAGAACCCGATAAATTGTCTGACCCCGACATGATTGCTGTACTCTGGGAAATGATATTTAGGGGGACCGACACCGTGGCGGTTTTGATCGAGTGGATACTAGCGAGGATGGTGCTTCATCCTGATGTGCAGAGGAAGGTGCAAGAGGAACTCGATGAGGTGGCTGGTGGAGGCTCACGCGCCTTCACGGAGGAGGATGTGGCGGCGACGGTGTACCTGCCGGCGGTGGTGAAGGAGGTTCTGAGGCTGCACCCACCGGGCCCACTTCTCTCGTGGGCCCGTTTGGCCATCACTGATACGACCATTGATGGGTATCACGTGCCCGCTGGGACCACGGCCATGGTTAATATGTGGGCCATAGCTAGGGACCCTGTGGTATGGAGGGACCCACTTGAATTTATGCCTGAGAGGTTCATGGGAGGAGAAGGGGCTGACTTCTCAGTTTTCGGGTCGGATCTTAGGCTCGCTCCATTTGGGGCGGGTAGGAGGAGTTGCCCCGGGAAGACTCTGGGTTTGACCACCGTGACCTACTGGGTGGCTAAGCTTGTGCACGAGTTTGAATGGCTACCGTCCGATGATGATGGGGTTGATCTAACGGAGGTGCTGAGGCTCTCTTGTGAAATGGCTAATCCTCTCACCGTTCAAGTGCGTCCCAGGCGTTGA 1365 0.5443 MNLMSSLAHHRIAAAAKACNATRLMAFSLGDTRAIVTCHPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRKIATKHLFSPMQIKSSEIQRSEIANQMVHMFRNRLPSPTPTSGGFTVRGVLKKASLNNMMWSVFGQRYKLNEANKGMEELRGLVEQGYDLLGTLNWGDHLPFLKDFDAQKIRSTCSKLVPKVNRFVGSIIADHRADKTQTNRDFVHVLLSLQEPDKLSDPDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPDVQRKVQEELDEVAGGGSRAFTEEDVAATVYLPAVVKEVLRLHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAIARDPVVWRDPLEFMPERFMGGEGADFSVFGSDLRLAPFGAGRRSCPGKTLGLTTVTYWVAKLVHEFEWLPSDDDGVDLTEVLRLSCEMANPLTVQVRPRR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi859g00006 454 PANTHER CYTOCHROME P450 78A7-RELATED 1 454 - -
Sebi859g00006 454 Pfam Cytochrome P450 24 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 392 401 IPR017972 GO:0005506|GO:0016705
Sebi859g00006 454 FunFam Cytochrome P450 78A5 1 453 - -
Sebi859g00006 454 CDD CYP78 22 446 - -
Sebi859g00006 454 SUPERFAMILY Cytochrome P450 8 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 Gene3D Cytochrome P450 3 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS P450 superfamily signature 255 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS P450 superfamily signature 309 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS P450 superfamily signature 390 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS E-class P450 group I signature 399 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS E-class P450 group I signature 308 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS E-class P450 group I signature 350 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS E-class P450 group I signature 244 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS E-class P450 group I signature 137 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS E-class P450 group I signature 264 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi859g00006 454 PRINTS E-class P450 group I signature 389 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi859g00006 Sebi-Chr859 108564 110134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi859g00006 1 454 Cytochrome P450 AT3G61880 71.991 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi859g00006 K20619 - gmx:100798388 743.806