Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi858g00010 ATGCCTGAAGCGGCTGCTGATGGTGCAGTTGTTTTGGGAAATCCAGTTGCTCCCCCTGTAAATGGAGACATGTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGATCTAGGAGAACTAGCAAAGGAGTCGAGTATCTGGTTGAAGCATCTGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCCAAGGCACGACAAGAGAATGGAGAAGTTGAATTGCCTGACCGAGACCGTGGGGCTGAGGCTACCCCTAGTGGGAAACAAATAACTTCATTGGTTAAGCCTGATTCTGCTGTGACAAATAGCATTGCTTCTGGTGGAGTTAGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGTGCACTAGGTGGCATGGTTAGACAGCTTTCAATTGACCAGTTTGAAAATGAAGGCAGGAGGGTCAGTTATGGGACTCCAGAAAGTGCAACTGCTGCTAGAAAATTATTGGATCGACAAATGTCTATCAATAGTGTCCCAAAGAAGGTAATAGCACACCTCTTAAAGCCTCGTGGCTGGAAACCACCAGTTCGCCGGCAGTTTTTCTTGGATTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAGAGGATATTTTCAAGTGAACCAACCGTCATACAGCTTAGGGCACCGATTAAAATATTTGGTGATTTACATGGGCAGTTCGGGGATCTCATGCGCCTCTTTGATGAGTATGGTGCACCTTCAACTGCCGGTGACATAGCATACATCGACTATCTATTCCTAGGAGATTATGTTGATAGGGGTCAACACAGCCTGGAAACTATAAGCCTTCTGCTTGCTCTGAAGGTTGAGTATCCGAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATCAATGCCCTTTTTGGTTTTCGAATTGAGTGCATCGAGAGGATGGGTGAGAGAGATGGGATTTGGGCATGGCACCGGATAAACCGTCTGTTTAATTGGCTTCCTCTGGCGGCTCTAATTGAGAAAAAGATTATTTGCATGCATGGGGGTATTGGTCGTTCAATAAATCATTTGGAACAAATTGAGAATATTCAGCGTCCAATTACGATGGAAGCAGGATCAATTGTGCTTATGGATCTATTGTGGTCTGATCCCACAGAGAATGACAGTGTGGAAGGGCTACGGCCCAATGCTAGAGGTCCTGGGTTAGTTACTTTTGGGCCTGATCGTGTCATGGAATTTTGCAACAACAATGATCTCCAGCTGATTGTTCGTGCGCATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTGATCACCCTCTTCTCAGCTACAAATTACTGTGGTACTGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAACTGATTCACCCGTTACCACCTGCAATTTCTTCACCAGAAACGTCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACAAGAGGCCGTCCTCAAGTAACAAATGACCGAGTGATCATTGAGAATGCCCCTAATGTTTATGCCTTAACGGCTTGTGCTATCGCCTGA 1620 0.4556 MPEAAADGAVVLGNPVAPPVNGDMYTDISTENAMLQGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGEVELPDRDRGAEATPSGKQITSLVKPDSAVTNSIASGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVIQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRVIIENAPNVYALTACAIA 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi858g00010 539 ProSitePatterns Serine/threonine specific protein phosphatases signature. 293 298 IPR006186 GO:0016787
Sebi858g00010 539 MobiDBLite consensus disorder prediction 70 98 - -
Sebi858g00010 539 SMART pp2a_7 196 480 IPR006186 GO:0016787
Sebi858g00010 539 SUPERFAMILY Metallo-dependent phosphatases 181 487 IPR029052 -
Sebi858g00010 539 CDD MPP_Bsu1_C 176 478 IPR041758 -
Sebi858g00010 539 Gene3D - 157 503 IPR029052 -
Sebi858g00010 539 PRINTS Serine/threonine phosphatase family signature 292 316 IPR006186 GO:0016787
Sebi858g00010 539 PRINTS Serine/threonine phosphatase family signature 259 286 IPR006186 GO:0016787
Sebi858g00010 539 PRINTS Serine/threonine phosphatase family signature 420 440 IPR006186 GO:0016787
Sebi858g00010 539 PRINTS Serine/threonine phosphatase family signature 224 251 IPR006186 GO:0016787
Sebi858g00010 539 PRINTS Serine/threonine phosphatase family signature 360 387 IPR006186 GO:0016787
Sebi858g00010 539 PRINTS Serine/threonine phosphatase family signature 442 458 IPR006186 GO:0016787
Sebi858g00010 539 PRINTS Serine/threonine phosphatase family signature 330 356 IPR006186 GO:0016787
Sebi858g00010 539 FunFam Serine/threonine-protein phosphatase 160 500 - -
Sebi858g00010 539 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 4 523 - -
Sebi858g00010 539 MobiDBLite consensus disorder prediction 72 86 - -
Sebi858g00010 539 Pfam Calcineurin-like phosphoesterase 224 431 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi858g00010 Sebi-Chr858 273795 278706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi858g00010 188 423 Calmodulin-binding Proteins AT5G63870 29.412 7.36e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi858g00010 - - lja:Lj3g3v2928410.1 999.579