Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi856g00010 ATGGCCGATGCTGTGGTTGCTTTCCTTCTACAAAACTTGTCCCAACTGCTGGCACACGAAGCTAAGTTGCTTTGTGGCGTGGAGGACAGAATCAGATCCCTCCACAATGAGCTTGAAATGATTATCGTGTTCCTCAAAGCCTCTGAAGGGAAGAAGAGCAAGAACGAGATGGAACAGAAAGTTGTCAGCCAAATCAGAGATATTGCACAAGTAGCTGAGGATGTCATTGACACATTTGTCACCAACGTTACCATTCACAAGAGAAGAAGCATGCTTGGGAAGATGCTCCATGGTGTTGACCACGCAAAGGTGCTCCATGACATAAATGATAAAATAGACAAGGTAAAGACCACCCTCAACGAGATACGTGAAAACAAGGCCAAATATGACTTCCCTGAAAGTGATCACTCCATGGCAAGAGAACAGGAGGAGAGGGTTCTATCACTTCACAAGCGAAGAAGAAACGTGGAAGAGGAAGATGTAGTAGGCTTTGTGCATGATTCCAAGGTAGTCATCAACAGACTCATAGAAGGGGATTCACGGGGCAAAGTCGTTTCTATCATTGGCATGGGTGGATTGGGTAAGACTACCCTTGCACGAAAGGTCTATAACAGCAACGAGGTGAAGCGATACTTCAATTGCCGTGCATGGGTTTATGTGTCAAACGAGTGTAGAGCTAAGGAACTTTTGCTTGGCCTTGTTAAGCATTTGATGCCAAATCCTGAATATGGATGTAAAAGCAACGAGAAGGGTAAGACACACAAGGAAGCAAATGTGCCTCTAGACTTTTCTATCTTGAGTGAGGATGAGCTGAAGAAGAAGGTGCAGGAATGCTTGAAGAGGAAAAGGTATCTCCTAGTCCTTGATGACTTGTGGAAAAAGCAAGATTGGGATGAGGTACAGGATGCTTTTCCTGATGACAATAGAGGCAGCAAAATATTGATTACTAGTCGTCTGAAAGAGGTAGCCTTGCATACCAGCCAAGACCCTCCTTACTGTCTTCAATTTCTCAGTGAAGAACAGAGTTGGGAGCTCTTCTCAAGAAAAGTGTTTAGGGGAGAAGAGTACCCTTCTGATCTAGAGCCTCTAGGCAAACAAATAGTTGAAAGTTGTCGCGGTTTGCCACTCTCAATTGTGGTGTTAGCAGGGCTTCTAGCAAACAAGGAAAGGTCACACAGAGAATGGTCCAAAGTGGTTGGCCATGTCAAATGGTATCTTACTCGTGATGAGACTCAAGTCAAGGATATAGTACTCAAACTCAGCTATGACAACTTGCCTAGAAGATTAAAGCCATGTTTTCTCTATCTTGGGATATTTCCTGAAGACTATGAAATCCACGTTAGGCAATTGCTGGAACGATGGGTTGCTGAAGGATTCATACAAGAATCAGGGAGTAGAGATCCAGATGATGTTGCTGAAGACTACTTGTATGAGCTCATTGATCGAAGTTTGATCCAAGTAGCACGAGTGAAGACTAGTGGTGGTGTGAAAACATGTCGCATCCATGATCTTCTTAGGGATCTCTGCATATCTGAGGGCAAAGAGGACAAGGTATTTGAAGTTTGCACTGATAATAACATTTTAATCCCAACAAAACCTCGTAGACTATCCATCCATTGTAGCATGCCTAGCTACATTTCTTCAAATAGCAATGACCATTCATGTGTCCGTTCTTTGTTTTGCTTTGATCCACACTACTATGTTGCTCCTAGTGAGTGGAAATGGCTTTCCAAAGGCTTCAAATTGGTTCGGGTGTTAGATCTTGTGGGGACGTGCTGCATAAAAATCCCTTCCAACTTGGCGGGCTTAATCCACTTAAGATACTTGAGAATAGACTCACAGTTTGTTAGAAGGATTCCAACTTCTATATGCACCCTTCAGAATCTACAAACCTTAGACTTGGGACCTTGTATCAGGATTATCTCGATTTCTTTTCCCAGTGGAATATGGAAGCTCAAGCATCTAAGGCATCTATATACACATGGGCCTATCATGCTCCGTAACCACCGTTCAGAATTAGATGGTGAAGTTATGTGGAATCTTCAAACCATCTCGTCCATTGCATTCAATAGACACACAACATCTCTCATACAGAAAGGAAGGTTCCCTAAACTAAGAAACTTGGGGTTGCATATCTCCTCTAACTGCGAGGGTGAATTGCCTAAACTGTTGCTAAGCCTACAACAATTAGGTCATTTGAATAATTCCGAGGACCTTCCAACTTGTGCAGCCTCCTTTCCTCCAAACATTACCAAGTTAACATTGACAGGTATTAGCTGCTTGAATGAGAACTGGATGAATGCTTTGGGAAATCTCACCAAACTACGACAATTGAGCTTATCTGGAGGATCTGCAGATCCCTTTGAGTTTAATTTTGTTGCAGGCGGGTTCCCTCAACTGCAGGTGTTTAAGATGAGATTTTTGAAAGTCCAAAAGTGGAAATTAGCGAATGGTGCAATGCCACTTCTACAAAAGCTGGTCATTGACAGATGTCGTGGGGTGGTTAATTTCCTAAATGAACTTGGGTCTTTAACTACCTTGATAAAAGTGCAAGTTTGGGAATCCTCTAAAACAACGGCTCGAATGCTACGATATTTGGAAACAAAGAATGGGATTGAACTTGTAGTAGGATATTTGAGTTAA 2643 0.4264 MADAVVAFLLQNLSQLLAHEAKLLCGVEDRIRSLHNELEMIIVFLKASEGKKSKNEMEQKVVSQIRDIAQVAEDVIDTFVTNVTIHKRRSMLGKMLHGVDHAKVLHDINDKIDKVKTTLNEIRENKAKYDFPESDHSMAREQEERVLSLHKRRRNVEEEDVVGFVHDSKVVINRLIEGDSRGKVVSIIGMGGLGKTTLARKVYNSNEVKRYFNCRAWVYVSNECRAKELLLGLVKHLMPNPEYGCKSNEKGKTHKEANVPLDFSILSEDELKKKVQECLKRKRYLLVLDDLWKKQDWDEVQDAFPDDNRGSKILITSRLKEVALHTSQDPPYCLQFLSEEQSWELFSRKVFRGEEYPSDLEPLGKQIVESCRGLPLSIVVLAGLLANKERSHREWSKVVGHVKWYLTRDETQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDYEIHVRQLLERWVAEGFIQESGSRDPDDVAEDYLYELIDRSLIQVARVKTSGGVKTCRIHDLLRDLCISEGKEDKVFEVCTDNNILIPTKPRRLSIHCSMPSYISSNSNDHSCVRSLFCFDPHYYVAPSEWKWLSKGFKLVRVLDLVGTCCIKIPSNLAGLIHLRYLRIDSQFVRRIPTSICTLQNLQTLDLGPCIRIISISFPSGIWKLKHLRHLYTHGPIMLRNHRSELDGEVMWNLQTISSIAFNRHTTSLIQKGRFPKLRNLGLHISSNCEGELPKLLLSLQQLGHLNNSEDLPTCAASFPPNITKLTLTGISCLNENWMNALGNLTKLRQLSLSGGSADPFEFNFVAGGFPQLQVFKMRFLKVQKWKLANGAMPLLQKLVIDRCRGVVNFLNELGSLTTLIKVQVWESSKTTARMLRYLETKNGIELVVGYLS 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi856g00010 880 Gene3D - 5 118 - -
Sebi856g00010 880 FunFam Probable disease resistance protein At1g61300 143 331 - -
Sebi856g00010 880 Pfam Rx N-terminal domain 5 89 IPR041118 -
Sebi856g00010 880 Coils Coil 105 125 - -
Sebi856g00010 880 FunFam Probable disease resistance protein At5g66910 336 423 - -
Sebi856g00010 880 Gene3D - 336 421 IPR042197 -
Sebi856g00010 880 Gene3D Ribonuclease Inhibitor 546 869 IPR032675 -
Sebi856g00010 880 Pfam NB-ARC domain 170 423 IPR002182 GO:0043531
Sebi856g00010 880 CDD RX-CC_like 2 124 IPR038005 -
Sebi856g00010 880 FunFam Probable disease resistance protein At1g63360 422 511 - -
Sebi856g00010 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 436 IPR027417 -
Sebi856g00010 880 Coils Coil 139 159 - -
Sebi856g00010 880 PRINTS Disease resistance protein signature 371 385 - -
Sebi856g00010 880 PRINTS Disease resistance protein signature 624 640 - -
Sebi856g00010 880 PRINTS Disease resistance protein signature 184 199 - -
Sebi856g00010 880 Gene3D - 141 329 IPR027417 -
Sebi856g00010 880 Gene3D - 422 512 IPR036388 -
Sebi856g00010 880 PANTHER DISEASE RESISTANCE PROTEIN RP 49 831 IPR044974 GO:0006952
Sebi856g00010 880 SUPERFAMILY L domain-like 500 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi856g00010 Sebi-Chr856 283549 286308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi856g00010 183 508 WRKY Transcription Factor Family AT5G45050 24.465 8.40e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi856g00010 - - mtr:25492796 1175.61