Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi855g00027 ATGGGAAATTGCTTTAGAGCTCGTCCAGAGGTTGATAACCCTCTAAGCTCCCAACCCTGTCCTGGTCACCAATTTGAGGTGTTTAATAACTATACCACAAAGCTCGATCTTCAAATGGTCACCCCAAAACATATTGGCATGGTAATAACCCCATATGGCTGGTTGTTCCCTAGTGATGGAGAAGAGCATGCTTATCATTATTGGAAATATGCTTATGATGTAACAAAAGTTCCTCGTAGAAGCACCCATTTGTTAGCACATTCAGGTCTAACAGTGCATGGACACAGTGATGAAGGTAAACCTGTGATTCTCCCCACTCCAAGATCTGAAGGGGACATACTCTCATCCCCACATTTAAAAGCCTTCACATTTAATGATCTTAAGAATGCCTCTAGAAATTTCTGTCCTGATAATCTAATTGGACAAGGGGGATTTGGTTATGTCTATAAGGGGTGGATTGATGGTCAATCCCTTGGGGCTGCAAAGTCTGGATTGGGAATAGCTGTAGCTGTGAAGAAGCTCAAGCCTGAAGGTTTTCAAGGGCATAAGGAGTGGCTGTCTGAAGTCAATTATCTTGGCCAACTTCATCATCCAAATCTTGTCAACCTTGTTGGATACTGCCTGGAGGGGGATAACCGGCTTCTAGTGTATGAGTACATGGCCAATGGAAGCTTGGAAAATCATCTATTTCGGAGTATGTTGATACCTTTAGTTGCTTAA 720 0.4278 MGNCFRARPEVDNPLSSQPCPGHQFEVFNNYTTKLDLQMVTPKHIGMVITPYGWLFPSDGEEHAYHYWKYAYDVTKVPRRSTHLLAHSGLTVHGHSDEGKPVILPTPRSEGDILSSPHLKAFTFNDLKNASRNFCPDNLIGQGGFGYVYKGWIDGQSLGAAKSGLGIAVAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVNLVGYCLEGDNRLLVYEYMANGSLENHLFRSMLIPLVA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi855g00027 239 SUPERFAMILY Protein kinase-like (PK-like) 107 233 IPR011009 -
Sebi855g00027 239 FunFam Serine/threonine-protein kinase BIK1 104 219 - -
Sebi855g00027 239 PANTHER OS01G0588500 PROTEIN-RELATED 95 231 - -
Sebi855g00027 239 ProSiteProfiles Protein kinase domain profile. 134 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi855g00027 239 Pfam Protein tyrosine and serine/threonine kinase 138 231 IPR001245 GO:0004672|GO:0006468
Sebi855g00027 239 Gene3D Phosphorylase Kinase; domain 1 106 219 - -
Sebi855g00027 239 ProSitePatterns Protein kinases ATP-binding region signature. 140 173 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi855g00027 Sebi-Chr855 306962 308810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi855g00027 70 230 Glycoside Hydrolase AT3G07070 40.476 3.79e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi855g00027 PK_Tyr_Ser-Thr 2.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi855g00027 - - gmx:100791844 252.677