Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi855g00022 ATGGGATCTGTTCATCAAGATGCACCAGTTGATCCAGAGAAAATGAGGCTGGAGGAAGCAGCTACAAAGGCACAGGCTGCTTTTAGGGGTTATTTGGCTCGGAGAGCATTTAAGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACTTGGTTAGGAGACAAGCTGTTAGTACATTATGTTGTATGTATGGAATTGTCAAGTTACAAGCACTTGTTCGTGGAGGAAGAGTTAGACAGTCTGATGTTGGTTTTGAAATTCGTGAAAAGTGCAATCTATTGAAGCCTCTGGATGGAAAACTTGTCAATCCAATTACTATATCCACAGAAATTATGAAGCTATCAGCAAATGCTTTCATCCGTAAGCTTCTTGGTTCATCAACTACAATAATGGCCTTGCGTTTGCAATATGTTCGTGGCGATCCAAATTCTGTTCTAAGTTGGTTGGAGCGCTGGTCAACATCTCACTTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCGGGATGCTAAGTCTCAGAGGAAGCAGGGTAATATTTCTGTTGGAGATGCTCAAATGAGCAAGTCAAAACGTACTCACAGAAAGCTTCCTACTGCAAATTTTGACTCAGTCCCAGCTCAAGCAAATCCTGAACTTGAGAAACCAAAACGAAACATAAGGAAAATTCCAAGCCAACCCACAGATCCTGTGCAGGAAAATCCACAAGCTCAGCCTCCTACTGCTAATTCTGACTCAATCCCAGTGCAGGCAAATCCTGAATTTGAGAAACCAAAACGAAACATAAGAAAAATTCCTAGCCAACCCTCGGAACCTGTCCAGGAAAATCCACAAAGTGAGCTTGAAAAGGTTAAACGTAGCTTGAGGAAGGTTCATAACCCAGTTGTTGAGAATGCTGTTCTGTCAGAAATTGAATCTGAGACTCCAAGGCTGCATTTGGAAAAGGAAACAGTTACCTTAAGTCTTGGTGTTTCAGAACAAGGGGTCATTAGTTCTAATGAGAAGGTCAAGAAGGACGCAACATTAACCATTTCCAGTGCGTCAGATATAGGAATTACTCCTAGACATTCAGTTAGTAAGGAGGTGTCTGAAACTCCAGGCAGCAATCAAGTGACTGTGGAATTGCAGCCCTTGACAGAGATTACAAGCAAAGATAAAATATTTCTGATGATGAATGAAAACCAGAAACCAACCCGGAAAGCCTCAATTGTAGCAAAGCAGGAACGTGCAGAGAATGGTTTACAGAATAGTCCAACATTACCAAGTTATATGGCAGCAACTGAATCTGCGAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGATTTGGACAAGATGGAAGTGAGAGAAATAGTCATGGTCGGCGACATTCTCTGCCATCTTCAACTAACAGCAAAATCAGTTCACATTCACCTAGGACACAGAGACCAGTGCAAGCAGGTGGCAAAGGGGGCCAGAGAAGTGACAAAACTGTATCAACTTCTAGAGATGCAAATGGAAAGGTAATTCAAGCAGAGTGGAGAAGGTGA 1533 0.4266 MGSVHQDAPVDPEKMRLEEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVSTLCCMYGIVKLQALVRGGRVRQSDVGFEIREKCNLLKPLDGKLVNPITISTEIMKLSANAFIRKLLGSSTTIMALRLQYVRGDPNSVLSWLERWSTSHFWKPVPQPKKIRDAKSQRKQGNISVGDAQMSKSKRTHRKLPTANFDSVPAQANPELEKPKRNIRKIPSQPTDPVQENPQAQPPTANSDSIPVQANPEFEKPKRNIRKIPSQPSEPVQENPQSELEKVKRSLRKVHNPVVENAVLSEIESETPRLHLEKETVTLSLGVSEQGVISSNEKVKKDATLTISSASDIGITPRHSVSKEVSETPGSNQVTVELQPLTEITSKDKIFLMMNENQKPTRKASIVAKQERAENGLQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNSHGRRHSLPSSTNSKISSHSPRTQRPVQAGGKGGQRSDKTVSTSRDANGKVIQAEWRR 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi855g00022 510 MobiDBLite consensus disorder prediction 409 510 - -
Sebi855g00022 510 Pfam IQ calmodulin-binding motif 41 58 IPR000048 GO:0005515
Sebi855g00022 510 Pfam IQ calmodulin-binding motif 19 38 IPR000048 GO:0005515
Sebi855g00022 510 PANTHER IQ-DOMAIN 5-RELATED 17 469 - -
Sebi855g00022 510 ProSiteProfiles IQ motif profile. 41 63 IPR000048 GO:0005515
Sebi855g00022 510 Pfam Protein of unknown function (DUF4005) 409 489 IPR025064 -
Sebi855g00022 510 MobiDBLite consensus disorder prediction 163 284 - -
Sebi855g00022 510 MobiDBLite consensus disorder prediction 487 501 - -
Sebi855g00022 510 ProSiteProfiles IQ motif profile. 17 45 IPR000048 GO:0005515
Sebi855g00022 510 SMART iq_5 16 38 IPR000048 GO:0005515
Sebi855g00022 510 SMART iq_5 39 60 IPR000048 GO:0005515
Sebi855g00022 510 MobiDBLite consensus disorder prediction 227 252 - -
Sebi855g00022 510 MobiDBLite consensus disorder prediction 411 426 - -
Sebi855g00022 510 Gene3D - 15 63 - -
Sebi855g00022 510 MobiDBLite consensus disorder prediction 458 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi855g00022 Sebi-Chr855 248228 252339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi855g00022 11 510 IQD Protein Family AT1G74690 43.097 9.58e-112 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi855g00022 - - lja:Lj0g3v0315489.1 778.089