Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi855g00021 ATGGAGTTTGCTTCAGGGAGATCTGGTGATGATGAAGGTCGTCTTAAACAAGACACTATTGTTGAGGAGCCACCTCTGGCTAATAACGAAAGATCCATGGTGGAGGCTGAACCAAGCACATCCTCTGCAGCAAAAAAGGAAGAGATTGATGATAAGCTTGATGCTACTAAAGCCGAAATGGGTGAGGTGAGAGAAGAAAATGAACGGTTAAAGATGTGCTTGGACAAAATAATGAATGAATATCGGACACTACAAATGCAATTTCACGATATGGTTAAGGAAGAAACAAAGAAGAATGATGATGCTAACCATGTCCATCAAGAGATAGAGGAATCGGATCTTGTTTCCCTGAGCCTTGGAAGAGTTCCAAGGAATGATGAGAAAGTAGTTAAAGTCTTTAAACCATTGAACGATGAAGAGTTTAACGAAGACTTGACTCTTGGATTGGAATGTAAGTTTGAAACATCAAAATCAGGGAGCACAACTGAAGCATTGCCAATAAATATTCCAAGCCCTGTGAATAGTTCTCATGAAGTGCCAAAGGAAGAGGCTGGGGATGAAACTAATTGGCCACCAACTAATAAGGCACTCAAGACAATGAGAGACACAGAGGATGAAGTTGCTCAGCAAACACCTGCTAAGAAAGCTAGAGTTTGTGTTAGAGCAAGATGTGATACCCCAACGATGAATGATGGATGCCAATGGAGGAAATATGGGCAAAAGATTGCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGCTGTACAATTGCACCATCATGCCCAGTAAGAAAACAGGTGCAGAGATGTGCTGAAGACACCTCCATTTTAATCACTACCTATGAAGATCAGTCCAACACAAATTCGTGGAGCAATGGGATCCTCAACTATGGTACTCATCAACCATATAACAATAATAGAAACAATATCCTTAACAGTTTAAACTTTGGAAGACCAACAACGGAAAATATCTATCAATCCTACATGCAAAAGAACAGCAACAACAACTCAAACCCTCCTCTTCAAGGTGCTTTACCGGACACTATATCTGCAGCAACAAAAGCAATCACAGGAGACCCAAGTTTTCAGTCAGCTTTGGCAACAATGCTTACTTCATTTATTGGGAGCACCCAAGGAAATCAAAGTGGTACTACTGTTGGAGAAATTTTGGGTCAAAAAATGAAATGA 1188 0.4074 MEFASGRSGDDEGRLKQDTIVEEPPLANNERSMVEAEPSTSSAAKKEEIDDKLDATKAEMGEVREENERLKMCLDKIMNEYRTLQMQFHDMVKEETKKNDDANHVHQEIEESDLVSLSLGRVPRNDEKVVKVFKPLNDEEFNEDLTLGLECKFETSKSGSTTEALPINIPSPVNSSHEVPKEEAGDETNWPPTNKALKTMRDTEDEVAQQTPAKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAPSCPVRKQVQRCAEDTSILITTYEDQSNTNSWSNGILNYGTHQPYNNNRNNILNSLNFGRPTTENIYQSYMQKNSNNNSNPPLQGALPDTISAATKAITGDPSFQSALATMLTSFIGSTQGNQSGTTVGEILGQKMK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi855g00021 395 Gene3D WRKY domain 216 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi855g00021 395 MobiDBLite consensus disorder prediction 160 195 - -
Sebi855g00021 395 SUPERFAMILY WRKY DNA-binding domain 222 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi855g00021 395 Pfam WRKY DNA -binding domain 230 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi855g00021 395 MobiDBLite consensus disorder prediction 1 59 - -
Sebi855g00021 395 MobiDBLite consensus disorder prediction 160 175 - -
Sebi855g00021 395 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 31 380 IPR044810 GO:0003700
Sebi855g00021 395 MobiDBLite consensus disorder prediction 41 59 - -
Sebi855g00021 395 ProSiteProfiles WRKY domain profile. 224 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi855g00021 395 SMART WRKY_cls 229 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi855g00021 395 MobiDBLite consensus disorder prediction 1 19 - -
Sebi855g00021 395 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi855g00021 Sebi-Chr855 223751 228371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi855g00021 60 282 WRKY Transcription Factor Family AT5G15130 43.651 2.49e-58 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi855g00021 WRKY 1.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi855g00021 - - lja:Lj0g3v0067609.1 394.815