Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi854g00012 ATGGGGATACCACAAGCCATGGATGCTCTCAGGGAAAGAGCGGCGTTCGTGAAGGAGTCGCTGCACAAGAGCCAGACCATCACCGATAACATGGTCTCCATTCTCGGTTCCTTCGATCACCGTCTCTCCGCCCTTGAGACCGCCATGCGTCCCACTCAGATAAAAACGCATTCGATTCGAAGTGCACATGATAATATTGACAAGACTCTAAAGGCAGCAGAGGGGATTTTGGCGCAATTCGACCAGACTCGCAAGGCAGAGGCTAAAATACTGCGAGGGCCACATGAGGATCTAGAGAGCTATTTAGAAGCAATTGATCAGCTGAGAGCTAATGTACGTTTCTTCAGCAGCAAAAAGAGTTTCAAAAGTAGTGAAGGTATCGTTAACCATGCCAATAGCTTGCTTGCTAAAGCTATCTCAAAGCTAGAAGAGGAGTTCAAACATCTTTTGACAAATTACAGCAAGCCTGTGGAACCTGACCGCCTTTTTGACTGCTTACCAAACTCTCTGAGGCCATCTGCTTCTGGGCAGCAAAATGAGGGTGGTGGCAAAAACCATTCCGAAAAAAAAAGTATGGAAACTGTCACCTTCACACTTCCAACCCTCATTCCACCCAGAGTTATACCTTTGCTACATGATTTAGCACATCAAATGGTTCAAGCTGGCCATCAACAACAGCTATTTCGAATCTACAGAGACACCCGTGCTACAGCACTCGAACAAAGTCTTAGGAAGTTAGGTGTAGAGAGGCTGAGTAAGGATGATGTTCAGAAAATGCAATGGGAGGTTTTGGAGGCTAAGATTGGGAACTGGATTCATTACATGAGGATTGCTGTCAAATTGCTGATTTCTGGGGAAAAGAAAATCTGTGATCAAGTATTTGATGGTGTTGATTCTTTGAGAACTCAGTGTTTTGCTGAAGTCACTGCTAGCAGTGTGTCTATGCTTCTTAGTTTTGGAGAGGCTATTGCCAAAAGCAAGAGGTCACCTGAAAAATTATTTGTTCTTCTAGACATGTATGAGATAATGAGAGAACTTCAGCCAGAGATTGAGACACTGTTTGAAAGTAAAGCTTGCACTGAAATGCGGGAAGCTGCAATGAGTTTGACAAAGCGACTAGCTCAGACGGCCCAAGAAACCTTTGGTGACTTTGAGGAAGCAGTTGAAAAAGATGCTACTAAAACTGCTGTGCTAGATGGAACTGTCCACCCTCTGACTAGCTATGTGATCAATTACGTTAAGTTTCTCTACGA 1253 0.4429 MGIPQAMDALRERAAFVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEGILAQFDQTRKAEAKILRGPHEDLESYLEAIDQLRANVRFFSSKKSFKSSEGIVNHANSLLAKAISKLEEEFKHLLTNYSKPVEPDRLFDCLPNSLRPSASGQQNEGGGKNHSEKKSMETVTFTLPTLIPPRVIPLLHDLAHQMVQAGHQQQLFRIYRDTRATALEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAVKLLISGEKKICDQVFDGVDSLRTQCFAEVTASSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQPEIETLFESKACTEMREAAMSLTKRLAQTAQETFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLY 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi854g00012 417 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 416 IPR004140 GO:0000145|GO:0006887
Sebi854g00012 417 Gene3D Exocyst complex component Exo70 75 417 - -
Sebi854g00012 417 SUPERFAMILY Cullin repeat-like 76 416 IPR016159 -
Sebi854g00012 417 MobiDBLite consensus disorder prediction 164 190 - -
Sebi854g00012 417 Pfam Exo70 exocyst complex subunit 270 416 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi854g00012 Sebi-Chr854 226948 231469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi854g00012 1 417 EXO70 exocyst subunit family AT5G52340 78.230 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi854g00012 K07195 - gmx:100779774 754.207