Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi854g00001 ATGGACAATTTGAATGATGAGTTATTATTTCAAATGATGCAAGAGAAAGATAATAGGAGTAATGAGGGTGATGGTGAAAATAACTTGAAATCCAGTAATGAAGTCACTGTTTGCTCTGATGAGGATGGTCCTGATGTTGATAAAAGGATTTCTGAGTTAAGTGATGAAGATATTAGATTGCTTGAGTTTGATTCTCTTCAGGATGCATATGATTTCTATAGTGAATATGCGAAATTTAAAGCAGGGGAAAGGAGTGAGAAGCATTTAAATAGGACAGATGGAATTAGGGAAGCTAAGGCCATTACTCGTACTAATTGTCTTGCGAGGATTCGATTGCATATGGACAAAGATAGTAGCAAGTGGAGGGTTGGAATGTTTGAGCCAGATCACAATCATGAGCTAACTCCTTCTACTATGGTACATTTGTTACCCAAATATCGCGGTTTGAGTGTTGCTGATAAGGCACAAGTAAACAGTCTTCACTTATACGGTGACTTGTACAATCACATTGACAAGGAGAATATGGCCAAAATTGAGGATGGGGATGCTTTTGCTGCCTTGTGCTATCTTCAAGCAAAGCATAATGAGTTAGCTTCTGATTACAAGTCTACATACACCCAACCTGTTTTGACAACTGCTTTGGAAAAGTCAGAGGTAGGTAATATTGTGACAATGAAGATGAATAAGTTTGGAAGTCCTGATTCCTTATATGTTGTGATTTATGATAAGGTTGTTGAATCAATCCCCCCGTCGTTGATTTGCAAAAGGTGGACAAAGTTTGCTAACGTTGATCAGGTTTATGCTATTTATAATGAAGATGGTGACACATCAAAAAAAGAAGTGTTGAGGTCTGGTGCTGTTGGTGCAGCCTGTAACAGGCTTAACAAGGCTGCACATAAAAATCCTCATAATTTTGTGAAAAATGTTGAGGATATCGATCATTTGGCAGATCAAATGGAAAGGCAAGATGGTGCTGATCTAAAAATTGGTGACATATCAAGGGTTGTTCGCGATCCAACAATTGTCAAAACTAAAGGTGCACCTCGTAAGAGTGTAAATCATTCTGTACATGGTAAAAGTTCATCAGGACAGGTTCAGAAATGTAATAAGAAGGCTAAACATGATGATGTTGTCAAATTAACTCAGGAGTCAGTAAATGATAGGCACTGTGGCGATGGTACAAATGCTCATTTGAAACAAGATTTGAATAAAGTGATTTATGAAAATAGAGGTGGTAATGAGGATTTCACACAGATGCACAATGATCAAAGAGTACATGTGGTGCCCCAGTACCCTCATATACCCATCCAACATCCATTTCATAACTCCACAGGTTATCATGGAATGAATACTTTTCCAAGTCATTCACAGAATTTTACAACTGCACTGAACGAGGTCGAGAGCAAAGTTGGTCTGAGCATGAAGTGTTTCAACCCAAGAGATAGTTGA 1449 0.3816 MDNLNDELLFQMMQEKDNRSNEGDGENNLKSSNEVTVCSDEDGPDVDKRISELSDEDIRLLEFDSLQDAYDFYSEYAKFKAGERSEKHLNRTDGIREAKAITRTNCLARIRLHMDKDSSKWRVGMFEPDHNHELTPSTMVHLLPKYRGLSVADKAQVNSLHLYGDLYNHIDKENMAKIEDGDAFAALCYLQAKHNELASDYKSTYTQPVLTTALEKSEVGNIVTMKMNKFGSPDSLYVVIYDKVVESIPPSLICKRWTKFANVDQVYAIYNEDGDTSKKEVLRSGAVGAACNRLNKAAHKNPHNFVKNVEDIDHLADQMERQDGADLKIGDISRVVRDPTIVKTKGAPRKSVNHSVHGKSSSGQVQKCNKKAKHDDVVKLTQESVNDRHCGDGTNAHLKQDLNKVIYENRGGNEDFTQMHNDQRVHVVPQYPHIPIQHPFHNSTGYHGMNTFPSHSQNFTTALNEVESKVGLSMKCFNPRDS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi854g00001 482 MobiDBLite consensus disorder prediction 16 44 - -
Sebi854g00001 482 Pfam FAR1 DNA-binding domain 80 135 IPR004330 -
Sebi854g00001 482 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 80 154 - -
Sebi854g00001 482 MobiDBLite consensus disorder prediction 346 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi854g00001 Sebi-Chr854 94836 97853 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi854g00001 FAR1 6.9e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi854g00001 - - ccaj:109792835 135.191