Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi853g00005 ATGATAAGTGTCCCCATTGTCCCTAAACGCCGTCGTTCGCTCAACGTCGCCGATGCCATCTGGCAAGCCGGGCTCCAACGCCCCTCTTTCCGCTGCCGAGATCCTTCCACGCGTCTTCCGACCGGCGGCGGTGACGCCGAGAACCTCCAGCGCATCCTGCGCATGCTCGCCTGTTACGGCGTCTTCGAGGAGCATCTCAGCGGCGGCGAAAGGAAGTACTCCCTAACGGACGTTGGGAAAACGCTTGTCACCGATGACAAGGCCTATCCTACGCTGCTATGTGCTCCAACACCACCAGGCAGTTGTGGACCCTACGAGGAACCCTTCGAGAGGGCAAATGGAGAGGCAGCGTACAGGTTATTACTTGAAGCAACCAGAGATGATGAGTTAATGGTGAAGGCCATGTCAGGGGTGTCAGTGCCCTTTATGAGGGCCATATTGGACGGCTACGATGGCTTCCAAGGTGTGGAGAAGCTTGTGGATGTGGGTGGCAGTGGCGGTGATTGCCTTCGTATGATCCTTCAGAAACATCCCACCGTCAAGGAAGGGATTAACTTTGACCTCCCTCAAGTGGTTGCCAAGGCACCGCAAATTCCAGGTGTTACCCACGTGGGTGGAGACATGTTCAAAGCTATTCCTCAAGGGGATGCTATCTTCATGAAGTGGGTGCTAACAACATGGACCGACGAGGAATGCAAGCACATAATGCAGAACTGTTACAAGGCACTCCCAAAGGGAGGGAAACTAATTGCTTGTGAGCCAGTGCTGCCAGAGCATTCAGATGAGAGTCACAGAACCAGGGCATTGCTTGAAGGTGACATATTCGTGATGACAATCTACAGAGCCAAGGGGAAGCACAGGACTGAGGAACAGTTCAAGCAGCTTGCCATTTCCGCTGGTTTCCCTCGTTTCAGAGCCTTTCATTTCGACTATTTCTATGCTCTACTTGAGTTTCAGAAATGA 963 0.5306 MISVPIVPKRRRSLNVADAIWQAGLQRPSFRCRDPSTRLPTGGGDAENLQRILRMLACYGVFEEHLSGGERKYSLTDVGKTLVTDDKAYPTLLCAPTPPGSCGPYEEPFERANGEAAYRLLLEATRDDELMVKAMSGVSVPFMRAILDGYDGFQGVEKLVDVGGSGGDCLRMILQKHPTVKEGINFDLPQVVAKAPQIPGVTHVGGDMFKAIPQGDAIFMKWVLTTWTDEECKHIMQNCYKALPKGGKLIACEPVLPEHSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFKQLAISAGFPRFRAFHFDYFYALLEFQK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi853g00005 320 Gene3D Vaccinia Virus protein VP39 96 320 IPR029063 -
Sebi853g00005 320 Pfam O-methyltransferase domain 107 301 IPR001077 GO:0008171
Sebi853g00005 320 PANTHER O-METHYLTRANSFERASE 12 310 IPR016461 GO:0008168
Sebi853g00005 320 SUPERFAMILY "Winged helix" DNA-binding domain 12 86 IPR036390 -
Sebi853g00005 320 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 320 IPR016461 GO:0008168
Sebi853g00005 320 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 318 IPR029063 -
Sebi853g00005 320 Gene3D - 12 90 IPR036388 -
Sebi853g00005 320 PIRSF O-mtase 1 320 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi853g00005 Sebi-Chr853 166276 168981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi853g00005 1 320 Monolignol Biosynthesis Gene Families AT3G53140 64.431 1.24e-153 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi853g00005 - - gmx:100784957 483.411