Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi852g00001 ATGGTGTTGAAGAAGAGGGTAGATTATGGATTCAATGGCTTTCGAGTCCCCGTTATTCCTAAAGCTCCTAGATCTGCAAGAAGGAGGATTTCATTCCACAATGCAGCTGAGGATGGTCAAGTTTGTGCTTTTGAACTATTGGCATCCTTAGCAGGCAAGTTGTTGCAGGAGGGTGAAAGTTCTGCTTCTAGCAATGCATCTGAAGGAAATCATCAGCCTGCCTTTAGCCAAGGTTTCGTTGAGCAAGATAGACAGGATGAAGTTAAACCATTGATGACAGAGGGAATTCATCAAGGAAGTTGTGCAGAGAGTATTTTTAAGACTGAGGTAGCCTCACAAAACAGTACTCAGAAACCTCTTTTGTGTGCCAAGACTGATTGTTCAGTAGGACACATTTCAGTTAATAATAGTTCTGACTCTTCTGAAAAGGTTGATGCTGATGTGAAGGCTGAAACTTTTGAATGGGATAATAAAATTGGACATTATTCTAATAGATTAGTAGAAGTACCTGAAAATTTTAGGAATTCTTGTGATGGTAAAATAAAGAGTGGATTTAGACTGGAACAGGAGGCTGGCAGTTCAGACTTTCAAGGATCAACTTTGGCTGATAAATGTGGTTTGAAGGACCAATTAGAATTGTATATGTCTCCTGCACTAATTGACTCAAAAGATGGTGTTAAATATCCACTTCATAGGAAATCTTTTCCCAGTGCTTCCTTTTCCAAGCATGGGAATGGTATTAAGTTAGATTTTAGAGATGATGACGAAAACTTTTTAAGGTGCAAAAAAATTTGCACAAAGTCAAAGGCTTTTAGGTCTCCACGACGCATTGCACACCGAAGAATCAAGAACCTGCTGTCTTCCAAATACTGGAAGGCTGGTCCAAAGCTGAAGGAGTGTGATCTTTCTATATCTGATCTAGGAGTACCTCTTTATCGTAAGAGGAAGACTTGTTACAATTCTGAAAGATCTCAGCGCAGCACTATTGTCAAGAGGAGGAAATTCTTTGACCGAGTTTCAGGGGTAACATCTGATGGAGGATTCAGCAGTGAGAGTGTGTCTAATTCACCTCAGAAAGGAACAGATGGAGACAACCCTGGCTCATCTGCAAAACTGCATGTACCTAAGGATTCTCATGTGAAATTTAGCATTAAGTCATTTAGGATACCAGAGCTTTATGTTGAGGTTCCCGAGACTGCAACTGTTGGTTCTCTAAAGAGGACAGTCATGGAGGCAGTGATGGCTATACTTGGAGGTGATGTTCATGTTGGTGTTGTTCTTCAGGGGAAAAAAGTTAGAGAGGATAATAGAACACTTGTCCAGACTGGTATATCTTGTAAAGAAAATCTTGATACCCTCAGTTTCACTTTAGAGCCCAGCTCTCTACTAGCTTCTCCAGCTGTTTGTGTTGGTGATCCTTCTTCTCAATGTGAAACATCCCAACCCACTAGGCCCCCAGAAACTCATGTCTTAAATTCAGCAATTACTGATACCTTACATGACCCTTCCTTGCTGACAAATCCGCTGACAAATCCGGTCAACCCAGTTGAGAGTAACCATGACTCTACTTCTTCCCCAACTGACACTATAGTTGACAATATAACACCAGATTCCAAAGCACTAGTTGCTGTTCCACCTAGCCCAGAAGCATTAGCTGTGGGTCCTGTGAGTCAGAAAACCAAGCGCTCTGAGTTTGTACAGCGTCGAACCAGGAGGCCATTCTCTGTGTCTGAGGTAGAAGCACTTGTTGAGGCAGTTGAAGAACTTGGAACTGGAAGGTGGCGTGATGTTAAGCTGCGAGCTTTTGAGAATGCAGATCATAGGACTTATGTAGACTTAAAGGATAAATGGAAGACATTAGTGCACACTGCAAGAATCTCCCCTCAACAAAGGAGAGGAGAGCCAGTGCCTCAGGAACTCTTGGAAAGAGTTTTGGCTGCTCATGCTTACTGGTCTCAGCACCAAGCCAAGCAACATGGCAATGGCAAGCATCAAGCTGGACCTGGAACCTTGAAGATTGCAGAAGCTACAGCTGAAGGAACTTGTGCATTGAAGGTGTCCAATGTGTAG 2070 0.4251 MVLKKRVDYGFNGFRVPVIPKAPRSARRRISFHNAAEDGQVCAFELLASLAGKLLQEGESSASSNASEGNHQPAFSQGFVEQDRQDEVKPLMTEGIHQGSCAESIFKTEVASQNSTQKPLLCAKTDCSVGHISVNNSSDSSEKVDADVKAETFEWDNKIGHYSNRLVEVPENFRNSCDGKIKSGFRLEQEAGSSDFQGSTLADKCGLKDQLELYMSPALIDSKDGVKYPLHRKSFPSASFSKHGNGIKLDFRDDDENFLRCKKICTKSKAFRSPRRIAHRRIKNLLSSKYWKAGPKLKECDLSISDLGVPLYRKRKTCYNSERSQRSTIVKRRKFFDRVSGVTSDGGFSSESVSNSPQKGTDGDNPGSSAKLHVPKDSHVKFSIKSFRIPELYVEVPETATVGSLKRTVMEAVMAILGGDVHVGVVLQGKKVREDNRTLVQTGISCKENLDTLSFTLEPSSLLASPAVCVGDPSSQCETSQPTRPPETHVLNSAITDTLHDPSLLTNPLTNPVNPVESNHDSTSSPTDTIVDNITPDSKALVAVPPSPEALAVGPVSQKTKRSEFVQRRTRRPFSVSEVEALVEAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLERVLAAHAYWSQHQAKQHGNGKHQAGPGTLKIAEATAEGTCALKVSNV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi852g00001 689 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 567 625 IPR017930 -
Sebi852g00001 689 SUPERFAMILY Homeodomain-like 572 653 IPR009057 -
Sebi852g00001 689 Gene3D - 559 663 - -
Sebi852g00001 689 MobiDBLite consensus disorder prediction 343 373 - -
Sebi852g00001 689 CDD SANT_TRF 572 622 - -
Sebi852g00001 689 SMART sant 570 623 IPR001005 -
Sebi852g00001 689 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 660 IPR031105 -
Sebi852g00001 689 FunFam Telomere repeat-binding protein 1 560 663 - -
Sebi852g00001 689 MobiDBLite consensus disorder prediction 507 527 - -
Sebi852g00001 689 MobiDBLite consensus disorder prediction 343 365 - -
Sebi852g00001 689 ProSiteProfiles Myb-like domain profile. 566 621 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi852g00001 Sebi-Chr852 15542 18745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi852g00001 470 621 Single Myb Histone (SMH) Gene Family AT1G15720 30.864 5.12e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi852g00001 - - gmx:100795471 1044.26