Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi851g00003 ATGCAAAAACCCCTTGCTTTGGAGATGGTTCTTTGTGATGAAAGGGGTGGAAAAATTCACGTTGTTGTTAGAAGGACTCTGGTTTACAAATTTCAATCAACCCTAATTGAGGGAGCTGCTTATTCCATATCTAATTTTGGTGTTGGTGAAAATTCTGGTGAGTTCAAGTATTCTATGTATTTGTACAAGATCAACTTCGAGTACCATACAAGAGTTGTTTTGATGAGGGACTGCACTATTCCCCGATTTCAATATTCATTTGTGTCTTTGGCGGACATAATGGCTCCTACTTTTGACAACAGCTACTTAGTTGACATAATGGGAGTGTTGACTGGTATTGGTACTGAGAAGGAGTCCAAAATAGAATGTGCTCTGTTCGAAAATTACCTGGATGATTTGAATGCATTTCTTGCTTGTGGTAATACTACAAATGTGGTAGTTGTTGTTCAGCTTGCAAAAGTAAAGTCATTCAAAGGAAAAGTGTCTCTGCAAAATGCTCTCCATGCTACTAAGTTGTTTTTCAACCCTGACTTTGAAAAAGCTGTGGAATTAAGGAAAAGTCAAATTGCTGAAGCTCCAAAGATGTCTCCTGAGGAGGAATTCTTGACTCATACTATAATGAAGACTATTGAGGAGCTAAAGGACTCTAATGAGGAATTTTGTTGTATTGTCATGGCTACGATCAAGCATCTTATTCATGGAGAAGACTGGTGTATAAGGCTTGCAGATGTGGCACATGTTGCATCTATTCTGGATATAAGTTGTTCTGATTTGTTGGAGTCTAATGTCCAGCCCAATGATAAGCATTTCCCACCTGAAATCTCTGCATTGGTTGATAAAACTTTTCTGTTCAAAGTAGAAAATAAGATAGTCTCAAATTCGAGGTTTGAGACATCTTACAAAAATGATGACTCTTTAGACTATGTAATACCTGAAGGACAATTAATGGTTGGTGGTGATTTATCCAATGATCTGCAAAAAGAGGTGGATTTGATGAGCCGCTTATCTGATTCAGTGAATGATGATGAAAATAATATTGTCTTATTGGGAACTGCTGATGGAGAAGGGCTCACAATGGATTCTGATTGTATCGCTCCATGTAAAAGAAATTCTGCTGATAGTACTGATGATCCCATTCTTGCTTCATCCTCCATCAAGTTGAAAAAAGTGATCAAACAAGAAAAAGACTGA 1191 0.3753 MQKPLALEMVLCDERGGKIHVVVRRTLVYKFQSTLIEGAAYSISNFGVGENSGEFKYSMYLYKINFEYHTRVVLMRDCTIPRFQYSFVSLADIMAPTFDNSYLVDIMGVLTGIGTEKESKIECALFENYLDDLNAFLACGNTTNVVVVVQLAKVKSFKGKVSLQNALHATKLFFNPDFEKAVELRKSQIAEAPKMSPEEEFLTHTIMKTIEELKDSNEEFCCIVMATIKHLIHGEDWCIRLADVAHVASILDISCSDLLESNVQPNDKHFPPEISALVDKTFLFKVENKIVSNSRFETSYKNDDSLDYVIPEGQLMVGGDLSNDLQKEVDLMSRLSDSVNDDENNIVLLGTADGEGLTMDSDCIAPCKRNSADSTDDPILASSSIKLKKVIKQEKD 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi851g00003 396 CDD RPA1_DBD_A_like 1 72 - -
Sebi851g00003 396 Gene3D - 2 77 IPR012340 -
Sebi851g00003 396 SUPERFAMILY Nucleic acid-binding proteins 84 188 IPR012340 -
Sebi851g00003 396 Pfam Domain of unknown function DUF223 8 103 IPR003871 -
Sebi851g00003 396 SUPERFAMILY Nucleic acid-binding proteins 7 77 IPR012340 -
Sebi851g00003 396 Gene3D - 79 195 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi851g00003 Sebi-Chr851 59769 62256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi851g00003 11 231 Core DNA Replication Machinery Family AT4G19130 23.346 9.31e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi851g00003 - - lja:Lj0g3v0149869.1 210.305