Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi84g00060 ATGGCTCAGACTACACCGAATCACACACAAACCGTATCCGGATGGGCAGCACATGATTCTTCTGGCAAGATTACCCCATACACCTTCAAAAGAAGGGAGAATGGCGTTAACGATGTGACTATGAAGATCTTGTATTGTGGGATTTGCCACACTGACCTCCACCATGTTAGAAATGACTGGGGCATCACTATGTATCCTGTTGTACCAGGGCACGAGATCATTGGGGAGATCACCAAGGTGGGGAGCGATGTGAAGGGTTTCAAGGAAGGAGACAGAGTGGGAGTGGGGTGTTTGGCAGCTACATGTTTGGATTGTGAGTACTGCAACACCGATCAGGAGAACTACTGTGAGAAGTTGCAGTTTACATACAATGGAATTTTCTGGGATGGTAGCATCACCTATGGTGGCTATTCCAATATGCTGGTTGCAGATTACAGATATGTGGTACACATTCCGGCAAATCTGGCACTGGACGCAGCAGCTCCTTTATTGTGTGCTGGAATAACAGTGTTTAGTCCCTTGAAAGACCACAATTTGGTAACATCACCAGGGAAAAAGATTGGGGTGGTTGGTTTGGGAGGCCTTGGACATCTAGCCGTCAAATTTGGTAAGGCATTTGGTCACCATGTTACTGTCATTAGCACTTCTCCGTCCAAAGAAGCTGAGGCTAAGCAGCGTTTGGGAGCTGATGATTTCATTCTCAGCTCCAACCCTAACCAATTGCAGGCTGCAAAGAGAAGCCTAGATTTCATTTTGGACACTGTATCAGCAGAACACTCTCTCTTGTCCATCTTAGAATTGCTCAAAGTAAACGGCACTTTATTTATCGTTGGTGCACCGGACAAGCCATTCCAATTGCCTGCTTTTCCATTGATATTTGGGAAAAGATCAGTGAAAGGTGGCATCATAGGGGGAATTAAAGAAACGCAGGAAATGTTGGACGTTTGTGGGAAGCACAATATCACATGTGACATTGAGTTAATCACACCAGAGAAAATCAACGAGGCTATGGAACGCCTTGCTAAGAATGATGTACGCTACCGTTTCGTCATTGACATTGCTGGCGACTCAAATAACTAG 1080 0.4546 MAQTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGVNDVTMKILYCGICHTDLHHVRNDWGITMYPVVPGHEIIGEITKVGSDVKGFKEGDRVGVGCLAATCLDCEYCNTDQENYCEKLQFTYNGIFWDGSITYGGYSNMLVADYRYVVHIPANLALDAAAPLLCAGITVFSPLKDHNLVTSPGKKIGVVGLGGLGHLAVKFGKAFGHHVTVISTSPSKEAEAKQRLGADDFILSSNPNQLQAAKRSLDFILDTVSAEHSLLSILELLKVNGTLFIVGAPDKPFQLPAFPLIFGKRSVKGGIIGGIKETQEMLDVCGKHNITCDIELITPEKINEAMERLAKNDVRYRFVIDIAGDSNN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi84g00060 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Sebi84g00060 359 Gene3D - 15 353 - -
Sebi84g00060 359 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0016616
Sebi84g00060 359 CDD CAD1 14 352 IPR047109 GO:0016616
Sebi84g00060 359 Gene3D - 166 323 - -
Sebi84g00060 359 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Sebi84g00060 359 SUPERFAMILY GroES-like 17 180 IPR011032 -
Sebi84g00060 359 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Sebi84g00060 359 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Sebi84g00060 359 FunFam probable cinnamyl alcohol dehydrogenase 15 173 - -
Sebi84g00060 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 321 IPR036291 -
Sebi84g00060 359 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi84g00060 Sebi-Chr84 1342448 1346127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi84g00060 14 354 Monolignol Biosynthesis Gene Families AT2G21730 58.480 2.95e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi84g00060 K00083 - gmx:100820588 642.114