Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi84g00041 ATGGCCTTCATAGATTCAAGTTTAAAGATCTTTACTTTGCCACAAAGGGGTTCAGGAGAAGGAGCTATTGGGACGTGTGGATTTGGTAGAGTCTACAAAGGCGTGATGCCAATTTCCAGAACTGAGGTTGCAGTGAAGAGGATGTCCCATGAATCCAGACAAGGGATGAGGGAATTTGTGTCAGAAATTGTTAGCATGGGTCGTCTTCGCCACAGGAATCTGGTTTCCCCTTCTGGGCTATTGCAGGCGCAAAGGAAGTTGCTTTTAGTCTATGACTACATGCCTAATGGAAGCCTAGACACGTATCTCTATACCCAACCAAAAGTGACCTTGAATTGGAGTCAAAGATTTAGAATCACCAAAGGGGTTGCTTCAGGTCTGTTTATCTACATGAAGAATGGGAGCAAGTTGTGGTCCACAGAGACAAAGGCTAGTAATGTACTACTAGATGCAGAAATGAATGGTAGATTAGGGAACTTTGGTCTTGCAAGGTTGCATGACCATGGAACTGATCCTCAAACTACCCTTGTGGCGGGAACTCTTGGGTATCTGGCCCCTGAGTTTACTAGAACGGTAAGGCCACCACAAGCTCTGATGTATTTGCTTTTGGTGCATTCCTTCTGGAGGTTGCTTGTGGTAGGGCCCATAGTGCATGTAGGGGAATGTGAGAGTGTAATTCTGGTTGATTGGGTGTTTGATTGCTGGAAAAAAGGTTATATTCTTGAGGCAAAGGACCCAAATTTGGGCACAGATTATAGGTCAGAGGAGGTAAAACTTGTGTTAAAACTTGGTTTGTTGTGCTCACATTCTGAGCCTTTGGCTAGACCAAGCATGCGCCAAGTTGTGCAATACCTGGAGAGGGATGTGCCTCTGCCAGATTTATCATTGTTTAGCTCATCTTCCACTGGTTTAACGTTTGGCCGAATGAAAGTTTTCAGGACTTTCCAAGGTCTTATCCATCTTCTACAGATAGGCCATTCTGCCATACTTCTTCAGTTGCTGAATCACTTCTCTCTGGTGGTCGTTGATTTCAGAAGGCAAATGAAATGGGAATGA 1056 0.4451 MAFIDSSLKIFTLPQRGSGEGAIGTCGFGRVYKGVMPISRTEVAVKRMSHESRQGMREFVSEIVSMGRLRHRNLVSPSGLLQAQRKLLLVYDYMPNGSLDTYLYTQPKVTLNWSQRFRITKGVASGLFIYMKNGSKLWSTETKASNVLLDAEMNGRLGNFGLARLHDHGTDPQTTLVAGTLGYLAPEFTRTVRPPQALMYLLLVHSFWRLLVVGPIVHVGECESVILVDWVFDCWKKGYILEAKDPNLGTDYRSEEVKLVLKLGLLCSHSEPLARPSMRQVVQYLERDVPLPDLSLFSSSSTGLTFGRMKVFRTFQGLIHLLQIGHSAILLQLLNHFSLVVVDFRRQMKWE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi84g00041 351 ProSiteProfiles Protein kinase domain profile. 17 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi84g00041 351 PANTHER - 21 290 - -
Sebi84g00041 351 FunFam Lectin-domain containing receptor kinase A4.3 94 302 - -
Sebi84g00041 351 Pfam Protein tyrosine and serine/threonine kinase 22 190 IPR001245 GO:0004672|GO:0006468
Sebi84g00041 351 Gene3D Phosphorylase Kinase; domain 1 23 94 - -
Sebi84g00041 351 Gene3D Transferase(Phosphotransferase) domain 1 95 298 - -
Sebi84g00041 351 SUPERFAMILY Protein kinase-like (PK-like) 22 293 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi84g00041 Sebi-Chr84 956083 957138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi84g00041 20 307 Receptor kinase-like Gene Family AT2G37710 58.904 1.19e-108 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi84g00041 PK_Tyr_Ser-Thr 1.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi84g00041 - - gmx:100802293 351.288