Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi84g00039 ATGAAGAAAGAATTGGGAAGGGGTCAATCTGGTGTTACTTATTTGTGTGTAGAGAGGAGAACAGGGAAAGAATACGCGTGCAAATCTATTGCAAGAGCGAAGCTATTGAATGAGCAAGAGATTGAGGATGTGAGAAGAGAGGTTATGATTCTTCAGCATCTTTCAGGGCAACCAAATATAGTGGAATTCAGGGGAGCTTATGAGGATAGGCAGAATGTGCATTTGGTGATGGAGTTGTGTAGTGGGGGTGAACTCTTTGACCGTATTATTGCTAAAGGGAACTATTCAGAGCGTGAAGCAGCCACAGTCATGAGGCAAATTGTTAATGTGGTTCATGTTTGTCACTTCATGGGTGTAGTGCATCGTGATCTCAAGCCAGAGAATTTCTTGTTGGCTACCAAGGAGGAGAATGCTGCAGTAAAAGCTACTGATTTTGGACTATCCATTTCATTGAAGAAGATTATTGTTCTGTTCTCCAACTGCTTTTATTAG 492 0.4167 MKKELGRGQSGVTYLCVERRTGKEYACKSIARAKLLNEQEIEDVRREVMILQHLSGQPNIVEFRGAYEDRQNVHLVMELCSGGELFDRIIAKGNYSEREAATVMRQIVNVVHVCHFMGVVHRDLKPENFLLATKEENAAVKATDFGLSISLKKIIVLFSNCFY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi84g00039 163 SUPERFAMILY Protein kinase-like (PK-like) 3 153 IPR011009 -
Sebi84g00039 163 SMART serkin_6 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi84g00039 163 FunFam Calcium-dependent protein kinase 1 1 84 - -
Sebi84g00039 163 ProSitePatterns Protein kinases ATP-binding region signature. 5 28 IPR017441 GO:0005524
Sebi84g00039 163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Sebi84g00039 163 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi84g00039 163 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Sebi84g00039 163 Gene3D Transferase(Phosphotransferase) domain 1 85 155 - -
Sebi84g00039 163 Pfam Protein kinase domain 2 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi84g00039 163 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi84g00039 Sebi-Chr84 924753 925315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi84g00039 1 149 EF-hand Containing Proteins AT1G50700 71.812 2.36e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi84g00039 Pkinase 8.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi84g00039 K13412 - gmx:100816157 273.863