Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi84g00038 ATGGGGCACTGCTTCACCAAACCCCACGATAACAGAGTACCTATCTCCTATGACTATGGTTCACCACCCCATCATTCCCAACAATTACGTCAAAGAACCCAACAACCTCAACCTCAACCTCGTTACCCTTACCGTGCTCCAAAGTCAGACCCAACTCCATCATCCACTTCATCCTCTGCTGATCAACCAATATTAGGCAAACCATACATTGACATAAAGGCCCTTTACACTTTTGGGAAGGAACTCGGAAGGGGTCAATTTGGTGTCACTTATCTTTGCACTGAAAAAGCCACAGGACGAAAATACGCTTCACCTAACAGGACAACCAACATCGTTGAGTTCAAAGGTGCTTATGAGGATAGACAGAGTGTGCATTTGGTGATGGAGTTGTGTTTGGGTGGTGAGCTTTTTGATCGGATCACTGCTAAGGGTAGTTACTCTGAGCGTGAAGCTGCTTGTATATTCAAGCAAATTGTGAATGTGGTTCATGCTTGTCATTTTATGGGGGGTGATGCATAG 519 0.4509 MGHCFTKPHDNRVPISYDYGSPPHHSQQLRQRTQQPQPQPRYPYRAPKSDPTPSSTSSSADQPILGKPYIDIKALYTFGKELGRGQFGVTYLCTEKATGRKYASPNRTTNIVEFKGAYEDRQSVHLVMELCLGGELFDRITAKGSYSEREAACIFKQIVNVVHACHFMGGDA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi84g00038 172 Gene3D Phosphorylase Kinase; domain 1 113 130 - -
Sebi84g00038 172 MobiDBLite consensus disorder prediction 1 63 - -
Sebi84g00038 172 MobiDBLite consensus disorder prediction 49 63 - -
Sebi84g00038 172 PANTHER SERINE/THREONINE-PROTEIN KINASE 70 169 - -
Sebi84g00038 172 SMART serkin_6 76 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi84g00038 172 MobiDBLite consensus disorder prediction 21 39 - -
Sebi84g00038 172 ProSiteProfiles Protein kinase domain profile. 76 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi84g00038 172 Gene3D Transferase(Phosphotransferase) domain 1 108 168 - -
Sebi84g00038 172 Gene3D Phosphorylase Kinase; domain 1 46 104 - -
Sebi84g00038 172 Pfam Protein kinase domain 108 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi84g00038 172 SUPERFAMILY Protein kinase-like (PK-like) 76 169 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi84g00038 Sebi-Chr84 921190 921785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi84g00038 1 169 EF-hand Containing Proteins AT3G20410 43.662 2.48e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi84g00038 Pkinase 4.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi84g00038 K13412 - fve:101297901 184.496