Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi84g00007 ATGGGGGCATTGGGCAGTGAAAGAGTCGCTTCGAACACCAAAAGGGTAACGGAACTATCCACCGACCACCACCCTCCACAGTCCATACAATACAAGACCACACAAGAGACGTCACCACCTTCATCTCCTCCCGCGCCCCACCATGGCAAAACCGCCTTCGTCGACGCCGCCACCGGCCAACACTTCACCTACCAACAGCTCTGGACAGCCGTCAACGCCGTCGCCACCTCCCTCTCCGACATGGGAATCCGAAAGGGCAACGTCGTCCTCCTCCTCTCTCCCAACTCCATCTACTGCCCCGTCGTTTGCCTCGCCGTCATGTCCCTCGGCGCCATCATCACCACCACCAACCCTCTCAACACCACGCGCGAAATCGCCAAACAGATCGCCGATTCCAAACCCGTCCTCGCCTTCACAATCCCTCCACTCGTTCCCAAAATCATCGGCGCATCGCCTTCGCTCCCAATCATTCTTATGGACGCTGAATCAGCCACAGTCTCAGTCTCAGGGGCTAAAATTGTAACGACATTGAATGAAATGATGAAGAAGCAACCGAAAACGAGTCAAATGAGGGACCGAGTTAACCAGGATGACACTGCCACGTTGCTGTATTCCTCTGGCACGACGGGACCTAGCAAAGGCGTGATCTCTTCCCATGGGAACTTGATAGCGATGGTTCAAATCGTTTTGAATCGGTTCAGTAAGGAAGAGGAGCAGCAAACCTTCATCTGCACTGTGCCAATGTTCCATATATATGGTCTAGCAGTGTTTGCAACGGGGCTTCTGGCTTCAGGATCAACCGTTGTGGTTCTGTCCAAATTTGAGATGCATGACATGTTGTTATCGATTGAGAAGTTCCGCGCGTCGTTTCTGCCGCTTGTGCCGCCTATACTGGTGGCGTTGCTGAACAACGCGGATGCGATTAAGGGGAAGTATGACTTGAGGTCCTTGCATACGGTGCTTTCTGGTGGAGCTCCGTTAAGCAAGGAGGTGATAGAAGGGTTTGTGGAGAAGTATCCAAACGTCACCATTATGCAGGGTTATGGCTTGACGGAATCTTCTGGAGTTGGGGCATCGACTGATTCGTTGGAGGAGAGTCGGAGTAACGAGGAAGCAACCACATCAACCCTTAATTCAGAGGGATGGTTAAGAACAGGGGATGTTTGCTACTTTGATGATGATGGATTCTTATTTATTGTCGATCGGTTGAAAGAGCTCATTAAGTACAAGGGATATCAGGTCCCACCAGCAGAACTAGAGGCTTTGCTGCTGACTCATCCTGCTATTTCAGATGCTGCTGTCATACCGTATCCGGATAAGGAGGCTGGGCAGGTTCCAATGGCATATGTTGTAAGGAAGGCTGGAAGTAGCATATCAGAAAAACAAGTTATGGATTTTATTGCAGGACAGGTGGCTCCTTATAAAAGAATTCGAAAAGTGGCTTTCATATCTTCCATTCCCAAAAATCCATCTGGTAAAATTCTTAGGAAGGATCTCATCAAGCTTTCAACATCTAAACTTTGA 1524 0.498 MGALGSERVASNTKRVTELSTDHHPPQSIQYKTTQETSPPSSPPAPHHGKTAFVDAATGQHFTYQQLWTAVNAVATSLSDMGIRKGNVVLLLSPNSIYCPVVCLAVMSLGAIITTTNPLNTTREIAKQIADSKPVLAFTIPPLVPKIIGASPSLPIILMDAESATVSVSGAKIVTTLNEMMKKQPKTSQMRDRVNQDDTATLLYSSGTTGPSKGVISSHGNLIAMVQIVLNRFSKEEEQQTFICTVPMFHIYGLAVFATGLLASGSTVVVLSKFEMHDMLLSIEKFRASFLPLVPPILVALLNNADAIKGKYDLRSLHTVLSGGAPLSKEVIEGFVEKYPNVTIMQGYGLTESSGVGASTDSLEESRSNEEATTSTLNSEGWLRTGDVCYFDDDGFLFIVDRLKELIKYKGYQVPPAELEALLLTHPAISDAAVIPYPDKEAGQVPMAYVVRKAGSSISEKQVMDFIAGQVAPYKRIRKVAFISSIPKNPSGKILRKDLIKLSTSKL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi84g00007 507 MobiDBLite consensus disorder prediction 10 38 - -
Sebi84g00007 507 Pfam AMP-binding enzyme C-terminal domain 418 493 IPR025110 -
Sebi84g00007 507 Gene3D - 405 505 IPR045851 -
Sebi84g00007 507 MobiDBLite consensus disorder prediction 355 374 - -
Sebi84g00007 507 SUPERFAMILY Acetyl-CoA synthetase-like 47 502 - -
Sebi84g00007 507 CDD 4CL 47 499 - -
Sebi84g00007 507 FunFam 4-coumarate--CoA ligase 2 405 506 - -
Sebi84g00007 507 Pfam AMP-binding enzyme 369 409 IPR000873 -
Sebi84g00007 507 Pfam AMP-binding enzyme 47 359 IPR000873 -
Sebi84g00007 507 Gene3D - 33 368 IPR042099 -
Sebi84g00007 507 Gene3D - 369 404 IPR042099 -
Sebi84g00007 507 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 38 361 - -
Sebi84g00007 507 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Sebi84g00007 507 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi84g00007 Sebi-Chr84 214010 217750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi84g00007 46 507 Monolignol Biosynthesis Gene Families AT1G20500 59.843 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi84g00007 K10526 - gmx:100811344 710.294