Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi84g00006 ATGAACTTGAATCATGGTGGAGTTTCTAGGGGATATGATTCTCAAAGTGGTGAGGAAGACAATGGTGGTTACTTTGTGGATGATGATGGTGGGGGTGTTTTCATAGTTGATGAGGACTGGGTTGAGAAATATGCAGAACATGATGAAAAAACTATGCCTCGCAATTCAGAGAATGATGATAACAGTTGTTGTCTTGGTTCAAATAACAGTGATAATAGTGGGGCTGGTAGTGGGGCTGGTTTCTTTGTTGATGACGATTTTGGTGGTGTTGTTTTGGTGGACCAGGATTGGGATGAAAATAATGAAGAAGGTGATGGAGATGCTTTTTTTTGGCAAAAGATTTTAATTGATAGTGATGCTGATATACCATGTAATTTCTATGTGGAGTATGGCAAAGCCAACAGTTTCAGTGTGCGTAGGGGCAGAGGTTTAAAAAGCAGAAAAATGATGGAGGAGTATCAGAAAGAGTTTATGTTCTCCAGAGAAGGTGCTCGTGATGATCGAGGAAAAAAGAAGGAAGATAGAGTACGTGAGCCCAAAGCTTTAACAAGGTGTGGGTGTCTAGCCAGATTTCATATTCATATTAATAAGGTGACTGGTCATTGGTATTGTATTTGCTTTGATGATGATCACAATCACAAGAGATTAGGTACGGTCCATTGTAGAATGCTTCCTCGTCATAAAAGGATGTCTGATAGTGATGTTTCACAAATGAACACCATGATTAAGGTTGGAATTAGGCCACCTCATATATTCAGTACATTTGCCAGCCAATCAGGCGGGTATGAGAAGATTGGCTTTAGAAAGAAATACATGTACAACAAGATTAATGAGCAGAGGCGGATATCAACCGTCTTTGTTGCTGTTGTTATTGCTAATGAGACCAAGGAGACTTATGTATGGTTTTTGGAGCAGTTTTCAAAGGCAATGAGAGGTAAAAGGCTGGATGCTGTAATAACTGATGGTGACATTGCGATGAAAAATTCAATTGAAAGGGTGTTTCCCAATTCTTATCACCGATTGTGCGCATGGCATTTGACCAGAAACGCAACTTCAATTATTCGGAGCACGACTTTCACAAAAGACTTTGAAAAATGTATGTTTGGATATTTTGATGTTGGCACATTTAGGAAGATGTGGGATGAAATGGTGTCAACATATGGGCTGGAAGAGAATACTTGGCGTTGCTTGACTCATATGCGCTTTAAAGAAAAGGAGGATGACTTTGTATCAATTCATGGGGATCCAGTTATGCAAACAGAAGTTGAATCTCTTGAATGGTCAGCTGCAAAAGTGTATATCAGAAGAATGGAGTCACGAGGGTTAGTTTGTGAGTATATTCTAGTTGTGCCGATGCATTTAGGAATTAATGACTTACCTGAGCCGTTGGTACTAAAAAGATGGACCAAGGGTGCTAAGGATGGTATGGAGAGTTTATTAGGTGATGATAGTCATTGTTGGGATGCACAGTGCAGTGCTAGAAAGGCATCATTAATGGGATATTACAATGATGTAAGTGATTTCAAAGCTCGTATTATTGAGCAATATAATGCTGAGAGAGAGAGACTTTTACAAGAGAAGACTGAATATATGGCGAAAGAAGCAACAGAACAAGGAGAGGGTGCTTCCTGTAGCAATGTGGGGGGTACCTGTTTGAGGAACCCTGTGCAGGCAGCAACAAAAGGTAGTGGGGGAGCAAGTTCATCCACTGGTATAAGGGTGAAAAAGAAACAAGTATGTTCCATATGCAAACTTCCAGGGCACAACAAAGTGAGATGTCCCATCCGTGGTGAAAATACTCAAATGAGGTAG 1812 0.4034 MNLNHGGVSRGYDSQSGEEDNGGYFVDDDGGGVFIVDEDWVEKYAEHDEKTMPRNSENDDNSCCLGSNNSDNSGAGSGAGFFVDDDFGGVVLVDQDWDENNEEGDGDAFFWQKILIDSDADIPCNFYVEYGKANSFSVRRGRGLKSRKMMEEYQKEFMFSREGARDDRGKKKEDRVREPKALTRCGCLARFHIHINKVTGHWYCICFDDDHNHKRLGTVHCRMLPRHKRMSDSDVSQMNTMIKVGIRPPHIFSTFASQSGGYEKIGFRKKYMYNKINEQRRISTVFVAVVIANETKETYVWFLEQFSKAMRGKRLDAVITDGDIAMKNSIERVFPNSYHRLCAWHLTRNATSIIRSTTFTKDFEKCMFGYFDVGTFRKMWDEMVSTYGLEENTWRCLTHMRFKEKEDDFVSIHGDPVMQTEVESLEWSAAKVYIRRMESRGLVCEYILVVPMHLGINDLPEPLVLKRWTKGAKDGMESLLGDDSHCWDAQCSARKASLMGYYNDVSDFKARIIEQYNAERERLLQEKTEYMAKEATEQGEGASCSNVGGTCLRNPVQAATKGSGGASSSTGIRVKKKQVCSICKLPGHNKVRCPIRGENTQMR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi84g00006 603 PANTHER OS01G0519700 PROTEIN 125 282 - -
Sebi84g00006 603 Coils Coil 513 533 - -
Sebi84g00006 603 Pfam FAR1 DNA-binding domain 125 214 IPR004330 -
Sebi84g00006 603 MobiDBLite consensus disorder prediction 1 16 - -
Sebi84g00006 603 MobiDBLite consensus disorder prediction 48 69 - -
Sebi84g00006 603 Pfam MULE transposase domain 284 349 IPR018289 -
Sebi84g00006 603 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi84g00006 Sebi-Chr84 177358 181148 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi84g00006 FAR1 7.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi84g00006 - - tpra:123896136 285.419