Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi84g00001 ATGGAAATTGAAATAATCTCCACTCAGTTCATCAAACCTTCTTCCCCAACACCAAAACATCTGAAAACTCACAAGCTCTCTCTTTTAGACCAGTTTGTGCCTTCTATACACACACCCGTGGTACTTTTCTACTCTGATCTAGATAAGAACACCCAACCCAAAAATAATGACACCACTCAGCAAAGATTGAATCAGCTAAAGGAATCCTTATCAGAAATCTTGACTCATTTTTACCCCTTCGCTGGAAGGATCAAAGACAATCTTTCCATAGATTGCAATGATGAAGGGGTTCACTATGTTGAGGCCAAATCAAGCTACAATCTGGTTGAATTTTTAAACCAATCTAATTTATCTTCATTTATCCACAAACTCCTTCCAAGTCAACCCACATGGGAACAAGAACCAAACGAAGGATATGTGGCTATGATACAAGTGACATGCTTTCCATGTGGTGGCATAGTGATTGGTGCCTTAGTGTCTCATATGGTAGCAGATGGAGTTGGTGCTAGCTTCTTTTTAAAGAGTTGGGGTGCTACCTCTCGCAGGGAATTTCCATATGAATTCCCAAAATTTGATTCCCCTTTCAGTGATGCATTGTCAAAAGATTTAAACGTGATGGCTCTGTCTGACCAATTCTTGAATAATGGTAGGCTTGATAAGAGGAGATTTTTGTTTGATGCAGAAGCTATTTCTAAGCTAAAAGCCAAAGGGTCTAATTCAACAGTGCAAAATCCTACTCGAGTGGAGGTAGTATCATCCCTCATATGCAAATGTGCCTCAGAAGCTTTCAGGGCAAACTCTGGTTTGGAGAGGCCAACTTTGTTAACACATGCTATGAATCTGCGTCCAAGGGCAAATCCTGCTTTTCCAGAATCATGTATGGGTAATTTCGTTTGGACAGCTTTTGCTCTAATGAGTAAAAAAGAGTTACCTGAATTGGTTGTTGAATTGAGGGAAGCAGTGACAGGTATTAACTCAGATTTTGTGAAAGGCTTCGAAGGTGAAGGAGGGTATGTAAGGTACAATGAGGTTTTAACAGAGATGGTTGAGAAAGCCTCGAGTGTTGCACTAACTAATGGGGTGAATTATGTTCATTGTACAAGTTGGTGTAATTTTGGTCTTTATGATTTTGATTATGGATGGGGAAAACCAACTTGGGTGTCTAGCACTACTATTTCCCCTGAAGTTGATGTTGTGTTTTTCAACTCGGTCCTCCTAATGGATACACCATCAGGCAATGGAATAGAAGCTTGGATTTATTTAAATGAGGATGATATGACTGTAATGCAACAGGACAAAGAGCTCCTTACTTTTGCCACCTTAGATCCAAATCCTTTACAAATAAACAGTTTTGTATCCAAGGCATAA 1368 0.3962 MEIEIISTQFIKPSSPTPKHLKTHKLSLLDQFVPSIHTPVVLFYSDLDKNTQPKNNDTTQQRLNQLKESLSEILTHFYPFAGRIKDNLSIDCNDEGVHYVEAKSSYNLVEFLNQSNLSSFIHKLLPSQPTWEQEPNEGYVAMIQVTCFPCGGIVIGALVSHMVADGVGASFFLKSWGATSRREFPYEFPKFDSPFSDALSKDLNVMALSDQFLNNGRLDKRRFLFDAEAISKLKAKGSNSTVQNPTRVEVVSSLICKCASEAFRANSGLERPTLLTHAMNLRPRANPAFPESCMGNFVWTAFALMSKKELPELVVELREAVTGINSDFVKGFEGEGGYVRYNEVLTEMVEKASSVALTNGVNYVHCTSWCNFGLYDFDYGWGKPTWVSSTTISPEVDVVFFNSVLLMDTPSGNGIEAWIYLNEDDMTVMQQDKELLTFATLDPNPLQINSFVSKA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi84g00001 455 Pfam Transferase family 1 435 - -
Sebi84g00001 455 Gene3D - 1 203 IPR023213 -
Sebi84g00001 455 PANTHER F21J9.9 4 439 - -
Sebi84g00001 455 Gene3D - 218 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi84g00001 Sebi-Chr84 48874 50241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi84g00001 1 395 Monolignol Biosynthesis Gene Families AT5G48930 26.037 5.23e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi84g00001 - - aprc:113870852 604.749