Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi846g00011 ATGAGGGAGCTAAGATGGGACTCTCAGGGCTTAAATCCAATAAGCCTTCTTATTGAGTGTGCTAAATGTGTTGCATCTGGAAGCATCAAGAATGCAGATATTGGACTTGAGTATATTTCTCAGATTTCATCTCCTGATGGTGATGCAGTGCAAAGGATGGTCACTTATTTCAGTAAAGCACTTGGATACAGGATAGTCAAACATTTGCCTGGTGTATATAAAGCTCTCAATTCCTCAAAAACATCATTGTCTTCAGAAGATATCCTTATTCAGAAATACTTCTATGAATTGTGTCCCTTTTTGAAGTTTTCATACCTGATCACAAATCAAGCCATTATAGAAGCTATGGAATGTGAAAAGGTGGTTCACATTATTGACCTTCATTGTTCTGAGCCAGCTCAATGGATAAATCTTCTGCTAACATTAAAGGACCGTCCGGGAGGCCCACCCCATCTCAAAATTACAGGCATTCATGAAAAGAAGGAGGTTTTAGACCAAATGAGCTTTCATTTGACAACTGAAGCTGGGAATTTAGATTTCCCTTTACAGTTCAATCCAATTGTTAGCAAACTTGAAGATGTTGATTTTGAAAACTTGCCTGTCAAGACTGGAGAAGCTCTTGCAATTACTTCAGTTCTTCAGCTGCATTCTCTTCTTGCCACTGATGATGAAATGGTTGGGAGGATCTCACCAGCAGCAGCAGCATCAATGAATCTGCAGAGAGCAGTGCATATGGGCCAAAGGACTTTTGCAGAATGGCTTGAGAGAGATATGATCAATGCATATATCTTAAGTCCTGATTCTGCATTATCACCTCTTTCTTTAGGTGCTTCACCTAAGATGGGGATCTTTCTTAATGCTATGAGAAAACTCCAACCAAAACTGATGGTGATTACTGAACAGGAATCAAATCTAAATGGTTCTAATTTAATGGAGAGAATTGACAGAGCATTGTACTTTTACAGTGCACTGTTTGACTGCTTGGACTCTACTGTTATGAGAACATCAGTAGAGAGACAAAACTTGAGAGCATGCTTCTTGGGGAGCAAATAA 1053 0.3932 MRELRWDSQGLNPISLLIECAKCVASGSIKNADIGLEYISQISSPDGDAVQRMVTYFSKALGYRIVKHLPGVYKALNSSKTSLSSEDILIQKYFYELCPFLKFSYLITNQAIIEAMECEKVVHIIDLHCSEPAQWINLLLTLKDRPGGPPHLKITGIHEKKEVLDQMSFHLTTEAGNLDFPLQFNPIVSKLEDVDFENLPVKTGEALAITSVLQLHSLLATDDEMVGRISPAAAASMNLQRAVHMGQRTFAEWLERDMINAYILSPDSALSPLSLGASPKMGIFLNAMRKLQPKLMVITEQESNLNGSNLMERIDRALYFYSALFDCLDSTVMRTSVERQNLRACFLGSK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi846g00011 350 Pfam GRAS domain family 14 348 IPR005202 -
Sebi846g00011 350 ProSiteProfiles GRAS family profile. 4 350 IPR005202 -
Sebi846g00011 350 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 342 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi846g00011 Sebi-Chr846 219999 221051 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi846g00011 1 350 GRAS Transcription Factor Family AT1G50420 49.020 2.82e-112 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi846g00011 GRAS 1.2e-83 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi846g00011 - - lja:Lj3g3v0821290.1 623.239