Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi845g00002 ATGTTTTCCCCCTTTGGAAAGATCGTTTCTGAGGACTTCTTGTGGCACACTCGTGGCCCAAAACGTGGAGAACCTCGCGGTTTTGCGTTTATCCAGTATAGCACAAAAGAGGAAGCAGAATTGGCCAAGGAGAAAATGCATGGGAAGTTAGCTTGTGGCAGGCCATTGGTGGTTCGTCTTGCTAGTGAGAAGTACATGTTGGAAACAGCTGATAGCTCTACAAAAGCAGCAGGTGAAGGACACAAGATGCATCTCACTGGTGGTGGCATGGGACAGACAAGTCGTAGTGCAAAAATAGCTGCAATAAAGAATAAATTGAAATCTTTAGAGGAGGAGAGCTCTAGGAAGAAGCAGAAACAAAGTGACAATATTTCTTGA 378 0.4471 MFSPFGKIVSEDFLWHTRGPKRGEPRGFAFIQYSTKEEAELAKEKMHGKLACGRPLVVRLASEKYMLETADSSTKAAGEGHKMHLTGGGMGQTSRSAKIAAIKNKLKSLEEESSRKKQKQSDNIS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi845g00002 125 Coils Coil 99 119 - -
Sebi845g00002 125 Gene3D - 1 75 IPR012677 -
Sebi845g00002 125 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 63 IPR000504 GO:0003723
Sebi845g00002 125 MobiDBLite consensus disorder prediction 72 125 - -
Sebi845g00002 125 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1 56 IPR000504 GO:0003723
Sebi845g00002 125 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 20 119 - -
Sebi845g00002 125 MobiDBLite consensus disorder prediction 104 125 - -
Sebi845g00002 125 SUPERFAMILY RNA-binding domain, RBD 1 67 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi845g00002 Sebi-Chr845 34653 35104 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi845g00002 1 64 Eukaryotic Initiation Factors Gene Family AT3G16380 37.500 2.08e-08 49.3