Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi844g00010 ATGGGAGGTCATCAGCGAGAAAAGGATGAGATTACTGTGACATGGGAGAATTTGGAGGCCACTGTTACAAATGGAAAGAATAGAAAAATAATTCTGCATGGACTCACAGGTTATGCCCAGCCAGGGAAGCTTTTGGCTATAATGGGTCCTTCAGGCTGTGGCAAATCCACACTTCTTGATGCTTTAGCAGGAAGATTGAGATCAAACATAAAGCAATCAGGGAAGATCCTAATCAATGGCCACAAACAGGAACTGGCTTATGGAACATCAGGCTATGTAACACAAGATGATGCTATGCTGTCAACTTTAACAGCTGGGGAAACTCTATACTACTCAGCTCAGCTCCAATTTCCAGATTCTATGACCATAACAGAGAAGAAGGAACAAGCAGATATCATACTCAAAGAAATGGGTCTCCAAGATGCCATTAACACAAGGGTTGGAGGGTGGGGTTCTAAAGGCCTAAGTGGGGGACAAAGGAGGAGACTCAGCATTTGTATTGAGATTCTAACACGCCCCAGACTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCCTACTATGTTATGAGTAGAATTGCAAGTTTAAATCTAAGGGATAGCATTAGAAGGACTATTGTTGTATCCATTCATCAACCAAGCAGTGAAGTTTTTCAACTTTTCCATGACCTCTGTCTTCTGTCTTCAGGTGAAACAGTATATTTTGGTCCTGCCCCTGATGCAAATCAGTTTTTTGCTTCAAATGGTTTTCCTTGCCCAACTCTCCACAATCCTTCTGATCACTACTTAAGGATCATAAACAAAGATTTCGAACAGGATGCTGAAGAAGGCTTTGGTAAAGGAGTAACTACTGAAGAAGCAATTGACATACTTGTAAAATCTTATAAATCGTCTGAAATTAGAAATCAAGTTCGGAATGAAGTGGCAAAAATAAGAATCGAGTGTAGTAGGGAAGAAGAGGACCCACGCTGCATTCCTGAGTCAGTGCATGGTTTTGATAAAAAGATCTTCGCTGCAAATATATCGTGA 1041 0.4111 MGGHQREKDEITVTWENLEATVTNGKNRKIILHGLTGYAQPGKLLAIMGPSGCGKSTLLDALAGRLRSNIKQSGKILINGHKQELAYGTSGYVTQDDAMLSTLTAGETLYYSAQLQFPDSMTITEKKEQADIILKEMGLQDAINTRVGGWGSKGLSGGQRRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNLRDSIRRTIVVSIHQPSSEVFQLFHDLCLLSSGETVYFGPAPDANQFFASNGFPCPTLHNPSDHYLRIINKDFEQDAEEGFGKGVTTEEAIDILVKSYKSSEIRNQVRNEVAKIRIECSREEEDPRCIPESVHGFDKKIFAANIS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi844g00010 346 CDD ABCG_EPDR 11 240 - -
Sebi844g00010 346 SMART AAA_5 41 230 IPR003593 GO:0016887
Sebi844g00010 346 Gene3D - 11 331 IPR027417 -
Sebi844g00010 346 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 258 IPR003439 GO:0005524
Sebi844g00010 346 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524|GO:0016887
Sebi844g00010 346 Coils Coil 305 325 - -
Sebi844g00010 346 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 8 316 - -
Sebi844g00010 346 Pfam ABC transporter 33 183 IPR003439 GO:0005524
Sebi844g00010 346 Pfam ABC-2 type transporter 215 316 IPR043926 GO:0140359
Sebi844g00010 346 FunFam ABC transporter G family member 11 11 298 - -
Sebi844g00010 346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 249 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi844g00010 Sebi-Chr844 190959 192949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi844g00010 31 219 Calmodulin-binding Proteins AT2G36910 31.122 1.31e-11 63.9