Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi844g00004 ATGACTTCCTTTCATCCATCTCTTCCAACTGCTCCTAATGATTACCAAACTAAACACAGATCAAATTCAGTTGTAACTGTCCTAGACATTGAGGCCCCAACACTGGAAATGAAAACTTGTAGTTGTAGAGCTCCAAGAGCTAGGGTTCAAGTTGAGACTCAAACAGAAGAGGGTGTCTGCTTGACATGGAAGGATGTATGGGTGATGACTACTTCAAATAGAAAGAATGGAAGTAAATCAATTCTTCAAGGTCTAACTGGTTATGCCAAGCCAGGACAGCTCTTAGCCATTATGGGCCCTTCTGGCTGTGGCAAGTCTACATTACTTGATACTTTAGCAGGGAGACTAGGCTCAAACACAAGGCAAACAGGGGAAATTCTTATCAATGGTCACAAGCAAGCACTAGCTTATGGAACCTCGGCATATGTCACACAAGATGATACCTTATTAACAACCTTAACAGTTAAGGAAGCTGTGCATTACTCAGCTCAACTCCAATTGCCTGATTCAATGTCCAAAGCAGAGAAGAAAGAGAGAGCTGACTTTACAATCAGAGAAATGGGTTTGCAAGATTCCATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATTAGTGGTGGTCAAAAGAGGAGAGTGAGCATTTGCATTGAGATCCTAACACGCCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGATTGGATAGTGCTGCTTCCTACTATGTCATGAAAAGAATTGCTACCTTGGGCAGAACAGTTTACTTTGGGCCTGCTTCTAATGCATGTGAGTTTTTTGCTTCAAATGGTTTCCCTTGTCCTGCCCTCCAAAATCCATCTGACCATTTACTTAAAACTATAAACAAGGATTTTGATGAGGATTTTGAGGTGGGTTTAATAGGGACTGGAATAATACCCACAGAAGAAGCAATCCGTATTCTTGTGCACTCATATAAATCATCTGAATGGAATCAAGAAGTTCAAAATGAAGTAGAATTACAATCTAAAAAGGACACCAGTTCAAATGACAAGAAGAGAGGGCATGCAGGCTTCCTTAATCAATGCTTTGTTCTTTACAAAAGATCATCTATCAACATGTTCCGTGATTCAGGATATTATTGGTTACGCCTTGCTATATATGTTGCATTGGCTATAAGTTTAGGCACTATTTTCTATGACTTGGGCACAAGTAAGGGCTCAATTCAGGATCGAGGTTCACTTCTTTCGTTTGTGACTGGATTCTTAACATTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAAGACATGAAGGTATTTCAAAGAGAGAGAGAAAATGGACATTATGGTGTTGTTGCATTTGTCATTGGGAACACCTTTTCATCTCTCCCATACTTGTTATTGGTTTCAGTGATTCCTGGAGCCATAACTTATTACCTTCCTGGTCTTCAGAAAGGATGTGAACACTTTCTGTACTTCCTCTGTGTTTTATTTTCTAGTCTGATGTTAGTGGAGAGTCTTATGATGATAATTGCCAGCATTGTCCCCAATTATCTAATGGGAATCATAACTGGTGCTGGAATTCAAGGAATCATGCTTTTACTTGGTGGGTTCTTTAAATTGCCAAATGATCTTCCTAAGCCAGTTTGGAGATACCCATTACACTATATTGCCTTCCATAGGTATGCCATCCAAGGATTGTTCAAAAATGAATATGAAGGACTAAGATTTGTTATAGAAAAAGATGGAGAAGGCTCACACAAGTACATTAGTGGTGAAGAGGTTTTAAGAAATACTTGGCAAACTGACATGAGTTACTCAAAATGGATTGATCTTGTGATTTTGCTAGGGATGATTGTTTCCTATCGTGTTTTTTTCTTTATTATCATCAAGACTATTGAGAAGGTGAAGCCCATTGTTGGATCATTATCATGCATGTCAGTGTCTCCCAAGCAAACAATAGAGGTGGTGGAGAACCCCAATGCCACTCCTATACATGGAGAGGTATGA 1989 0.3962 MTSFHPSLPTAPNDYQTKHRSNSVVTVLDIEAPTLEMKTCSCRAPRARVQVETQTEEGVCLTWKDVWVMTTSNRKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGHKQALAYGTSAYVTQDDTLLTTLTVKEAVHYSAQLQLPDSMSKAEKKERADFTIREMGLQDSINTRIGGWGVKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIATLGRTVYFGPASNACEFFASNGFPCPALQNPSDHLLKTINKDFDEDFEVGLIGTGIIPTEEAIRILVHSYKSSEWNQEVQNEVELQSKKDTSSNDKKRGHAGFLNQCFVLYKRSSINMFRDSGYYWLRLAIYVALAISLGTIFYDLGTSKGSIQDRGSLLSFVTGFLTFMTIGGFPSFVEDMKVFQRERENGHYGVVAFVIGNTFSSLPYLLLVSVIPGAITYYLPGLQKGCEHFLYFLCVLFSSLMLVESLMMIIASIVPNYLMGIITGAGIQGIMLLLGGFFKLPNDLPKPVWRYPLHYIAFHRYAIQGLFKNEYEGLRFVIEKDGEGSHKYISGEEVLRNTWQTDMSYSKWIDLVILLGMIVSYRVFFFIIIKTIEKVKPIVGSLSCMSVSPKQTIEVVENPNATPIHGEV 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi844g00004 662 Pfam ABC-2 type transporter 354 565 IPR013525 GO:0016020|GO:0140359
Sebi844g00004 662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 250 636 - -
Sebi844g00004 662 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 313 IPR003439 GO:0005524
Sebi844g00004 662 Pfam ABC transporter 83 233 IPR003439 GO:0005524
Sebi844g00004 662 Gene3D - 62 256 IPR027417 -
Sebi844g00004 662 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524|GO:0016887
Sebi844g00004 662 SMART AAA_5 91 301 IPR003593 GO:0016887
Sebi844g00004 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 254 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi844g00004 Sebi-Chr844 53867 60234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi844g00004 81 253 Calmodulin-binding Proteins AT2G36910 30.939 3.05e-11 65.1