Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi842g00007 ATGTGGCATCATGAAGGAACTAAAGCAATTCAGAGTATAGTTTTGAACCCAACTCAACAATATGAAGCACACTGGAGCCCTAAAGCCTTCTCCGAGACAACAGAGCTAAAATTTCTCAAGTTAAGTGATGTGCAACTTCATTCTGACCTGAACTGCCTTCCTAGTTCGCTAAAAGTTCTTCACTGGAATGGGTGCTCTTTGAAAACCCTGCCACTTACCAATCAACTGTATGAATTTGTTGACATTAAACTGTCTCATAGCAAAATTGAACAACTTTGGCATAGTAAAAAGTTTCTGGAAAAGCTGAAGTACTTGGATTTGAGTTTTTCCAAAAATCTAAAGCGATCTCCTGATTTTTCTGGGGTTCCAAACCTTGAAAAATTGATCCTCGAAGGTTGTACAAGGCTCACTGAGGTTCATCCATCCCTTTTGCACCAGAAGAAACTTGTTATAATGGATTTAAAAGACTGCAAAAGTCTTAAATCCCTTCCAGAGGGTTTAAAAGAAAAGGAGTGTTCAGAGGAACTTTGCCCCATTGAATCTGCTAATAAAAGCAAAAAATTATCATTTGCTTGGGGGAAAGAGCCAGTATCTAGTTCATTGAGGACTAAGCCAACTGTCATTAGACTCAGATCACCCGGTTCTGTCTTAAGTCTACATTCTCTGAGCATTATGAATTTAAGCTACTGCAATTTGTCTGAAGAATCAATCTTGCATATTTCTTGCGACCTACCCTGTTTGAAGTTTTTGGATCTAAGTGGGAACAATTTTGTTCGTGTGCCATTTAATATTTCTAAACTTACAAAGCTGGAATATCTTGGGCTAAATTATTGCCAAAAACTTCAATGGTTGCCAGAACTTCCATCAAGTATAAAAGAATTGGATGCAAGCCAGTGTGATTCACTGCAAACCTCCAAATTCAATCCATACAGTCTCTTTGCTTCACTTGGACAATATCCTTCTGAGGTACTGGATCCATTTGACATGGTGATCACAGGGGGTGAAATTCCATCGTGGTTTGACCATCAAGAAGATGGTGGATATGTATTAGTCCCTGGTAATTTCTCTTCAAATGAGTTGGTGGGAATTGCTTTGTGTTTCTTGTTGACAAGTTATGCTCAGTCTTGCCATTATGCAATCGAGTGTTCTGCTGCTGATCATGTATTCTTCAAGAAAAGGCTTTTACCTCAGATGAAGCCTGGTTGTCCTCACCTTTATATTCTCTTTTTCGTGGACCCTCTATCTTGTGTTGAAATCAGCCAAGATGGAACTGAAGCAATCCAAAGTATAATTCTAAGCCCATCCAAACCATATGTAGCACGTTGGAGCAGTGATGTCTTCTCAAAAACAAGTCAGCTGAAATTTTTGAGTTTATGTCGGGTGCAACTTCCCATTGGCCTCAACTGTCTTCCTAGTTCACTAAAAGCTCTTCACTGGATAGGATGTCCTCTGAAGTCTCTGCCCTTTGGAAACCAACCGTATCAAGTTGCTGAAATCAAACTGTGTTTTAGCAGAATTGAACAACTTTGGCCTGGAAAAAAGTTTCTAGGGAAGCTGAAGTACATGGATTTGAGTTATTCCCGGAATCTAAAGCGATTACCAGATCTTTCTGCTGTTCCCAATCTTGAAACACTTGATCTTAGACATTGTTCACTCCTTACAGAGGTTCATCCCTCCCTTGTTCACCACAAGAGCCTTGTTCTAATTAATTTAGATAGCTGCAGAAGTCTTAAAACTCTTCCAAGTAAATTGGAGATGAGTTCCCTGAAGGAATTAATTCTTAGTAACTGCTCTAGATTTGAACAACTTCCTGAATTTGGGGAAAGCATGAAACATCTGTCAATGCTTTCTTTAAAAGAAACGGCTATAAGAAAACTACCCACATCACTTGGATGTTTAGTTGGCCTTTCTGAATTGAACTTGGAGAATTGCAAAAATCTTGTTTTCCTTCCAGAGTCCATGCATGGATTGCAGTCCCTCAGAATTCTGAAGGCTTCTGGTTGCTCAAATCTCTGTAGATTACCAGAGGATTTAAAGGAAATGAAGTGTTTGGAGGAACTTTGTGCTACTGAAGTCAGTGCATTATCTTTTGAAGGGGGGAAAGGAACTCCAACTGGACTCAGATTGAGATTGCCACTTTCTGTCTCAAAACTGCCCTTTTTGAGCAGTCTAGATTTAAGTTACTGCTCTCTATCTGAAGAATCATTCCCTGATGATTTTTGTCAGTTCCCTTCACTAGAAGATTTAAATCTAAGTGGCAACAATTTTGTTAGAGTACCAATAAGTATTCATAAACTTTCAAAGCTTAGATATCTTTACCTAAACCATTGCCCAAAGCTTCAATTATTGCCAAAGCTTCCATCAGAAATATTTGAATTGGAAGCATGCAATTGTGATTCACTGGAAACATTTGAATTCAATCCTTTAAAGACATGCAATGTCTTTGAATCACCTGGCCAAGACCGTAGTCAGGTCTTTAGCATGCTGATCACAGGGTGTGAAATTCCATCATGGTTTGACCATCAAGAAGAAGGTAGCTATGTATCAGTCCCACATAATTTCCCTCTAAATGAAAGGGTTGGAATTGCTCTGTGTTTTCTATTCCTAACATCTGAGGCACGCTATGATCCAATAGAATGCTCTTTGGCTGGCCACAAAGCATCAACCTTCCCAGTGAGGAATGGAGGAGCTGCCAGCAGCATGAACTGCTGCACAAGTAGACAGCAAAAACTCAGAAATGTTGTGGAGAATTTATGA 2757 0.3939 MWHHEGTKAIQSIVLNPTQQYEAHWSPKAFSETTELKFLKLSDVQLHSDLNCLPSSLKVLHWNGCSLKTLPLTNQLYEFVDIKLSHSKIEQLWHSKKFLEKLKYLDLSFSKNLKRSPDFSGVPNLEKLILEGCTRLTEVHPSLLHQKKLVIMDLKDCKSLKSLPEGLKEKECSEELCPIESANKSKKLSFAWGKEPVSSSLRTKPTVIRLRSPGSVLSLHSLSIMNLSYCNLSEESILHISCDLPCLKFLDLSGNNFVRVPFNISKLTKLEYLGLNYCQKLQWLPELPSSIKELDASQCDSLQTSKFNPYSLFASLGQYPSEVLDPFDMVITGGEIPSWFDHQEDGGYVLVPGNFSSNELVGIALCFLLTSYAQSCHYAIECSAADHVFFKKRLLPQMKPGCPHLYILFFVDPLSCVEISQDGTEAIQSIILSPSKPYVARWSSDVFSKTSQLKFLSLCRVQLPIGLNCLPSSLKALHWIGCPLKSLPFGNQPYQVAEIKLCFSRIEQLWPGKKFLGKLKYMDLSYSRNLKRLPDLSAVPNLETLDLRHCSLLTEVHPSLVHHKSLVLINLDSCRSLKTLPSKLEMSSLKELILSNCSRFEQLPEFGESMKHLSMLSLKETAIRKLPTSLGCLVGLSELNLENCKNLVFLPESMHGLQSLRILKASGCSNLCRLPEDLKEMKCLEELCATEVSALSFEGGKGTPTGLRLRLPLSVSKLPFLSSLDLSYCSLSEESFPDDFCQFPSLEDLNLSGNNFVRVPISIHKLSKLRYLYLNHCPKLQLLPKLPSEIFELEACNCDSLETFEFNPLKTCNVFESPGQDRSQVFSMLITGCEIPSWFDHQEEGSYVSVPHNFPLNERVGIALCFLFLTSEARYDPIECSLAGHKASTFPVRNGGAASSMNCCTSRQQKLRNVVENL 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi842g00007 918 Gene3D Ribonuclease Inhibitor 205 319 IPR032675 -
Sebi842g00007 918 SMART LRR_typ_2 718 742 IPR003591 -
Sebi842g00007 918 SMART LRR_typ_2 766 793 IPR003591 -
Sebi842g00007 918 SMART LRR_typ_2 122 146 IPR003591 -
Sebi842g00007 918 SMART LRR_typ_2 539 563 IPR003591 -
Sebi842g00007 918 SMART LRR_typ_2 244 267 IPR003591 -
Sebi842g00007 918 SMART LRR_typ_2 610 633 IPR003591 -
Sebi842g00007 918 SMART LRR_typ_2 743 765 IPR003591 -
Sebi842g00007 918 Gene3D Ribonuclease Inhibitor 415 585 IPR032675 -
Sebi842g00007 918 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 586 688 - -
Sebi842g00007 918 SUPERFAMILY L domain-like 15 307 - -
Sebi842g00007 918 SUPERFAMILY L domain-like 432 807 - -
Sebi842g00007 918 Gene3D Ribonuclease Inhibitor 586 700 IPR032675 -
Sebi842g00007 918 Gene3D Ribonuclease Inhibitor 20 189 IPR032675 -
Sebi842g00007 918 Gene3D Ribonuclease Inhibitor 703 839 IPR032675 -
Sebi842g00007 918 Pfam Leucine rich repeat 721 777 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi842g00007 Sebi-Chr842 158109 172636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi842g00007 408 695 WRKY Transcription Factor Family AT4G12020 37.459 1.30e-38 154