Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi841g00003 ATGCGAGGTGTATGCGCGCGGAAACAAGGGCGGCCTCGATGGTCCCCGAGGAGGTTGTGCGCTGCTGGGATGCCGCTGGGGTCTGGGACGGTGACGAAGGGAGCGACTGTGAACGGAGGAGCGGTGAGGATGGGGGAGAACGCCGCACGACGAAGACAGAGGGCATGCAGAGGGTCTACCACTGTGGGGGTTGGACACGCTCTCGCCAGCGACGCCCGTGGCGGTGCGGTCTCGGCGACGATGATGGGTGGCTTCGATGGTTACAGAAACAAGTACAAGGAGACCACTGCCCTGGCTCCTAGCAGCATGAAGATTAAGGTCGTGGCTCCACCAGAGATAAAGTATAGTGTCTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGGTGATTGTTTTATCACAAGTCAACACTTTGCCATGTTGTTTTGCATCAAGTGCATATCCAAATGTAGTTCCAGAGGTTCTGAATCTTTTGTTATCTGAGGAGATCAAGATATTATCTATGTACTAG 522 0.5441 MRGVCARKQGRPRWSPRRLCAAGMPLGSGTVTKGATVNGGAVRMGENAARRRQRACRGSTTVGVGHALASDARGGAVSATMMGGFDGYRNKYKETTALAPSSMKIKVVAPPEIKYSVWIGGSILASLSTFQQVIVLSQVNTLPCCFASSAYPNVVPEVLNLLLSEEIKILSMY 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi841g00003 173 Pfam Actin 93 137 IPR004000 -
Sebi841g00003 173 Gene3D - 93 116 - -
Sebi841g00003 173 Gene3D - 117 136 - -
Sebi841g00003 173 SUPERFAMILY Actin-like ATPase domain 93 135 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi841g00003 Sebi-Chr841 74302 75552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi841g00003 80 135 Cytoskeleton Gene Families AT3G46520 78.571 1.86e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi841g00003 K10355 K05692 rvl:131300092 78.9517