Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi840g00020 ATGAATTCTGGTGCTGTGTTAGCATTGCATCCTTTGGACAATGTGTTCAGAACAAGGGAGCCTCCTGATTTTGAGGAGGACTTTGTGGAGAAAGATCCAACCGGCCGTTATAGGGGCTTTGATGAAGTTAATGGAATAGAAGTTGCTTGGAACCAAGTTAAGATTGATGGCCTCTTGCATTCAGTAGATGATCTGGCAAAATTGTATTCAGAAGTCAATCTATTGAAGTCTTTGAAACATGAAAATATCATTAAGTTCTATAATTCCTGGATTGATGATAAGCAGAAAACTGTTAACATGATCACTGAACTCTTCACATCTGGAAATTTAAGGCAATACCGTAAGAAGCATAAATATGTTGAAGTGAAAGCCATAAAAGGTTGGGCCAGGCAGATTCTTCAAGGCTTAGTATATCTTCACAGTCACAGGCCACCTATTATTCACAGAGACTTGAAGTGCGACAACATATTTGTGAATGGAAACCAAGGAGAGGTTAAGATAGGAGACCTCGGTTTAGCAATTGTCATGCAACAACCAACTGCTCAAAGTGTTATTGGGACCCCTGAGTTTATGGCTCCAGAGCTATATGAAGAGGAATATAATGAACTTGTTGACATCTATTCTTTTGGGATGTGCATATTGGAGATGGTTACTCTTGAGTATCCCTACAGTGAATGCAAAAATCCAGCTCAAATCTTTAAGAAAGTTACCTCGGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGACCCCCAAATTAAAGAGTTCATTGAGAAATGTTTGGTTCCAGCATCTGAGAGATTGTCCGCAGAGGAGCTTCTTAAAGACCCATTTCTACAAGTTGAGAATCCAAAGGATCCAAACTTTTATCCTTTACAGTCACCTATTAAAACTCCAAGAGCTACAAATATGTCCAAGTCTGGTTCTCCTTCTCTTTCCATGGACATAGATGCTGACTACAAACAGCTTTCTGTGAGTATCTGTGCTGAAAGCAACCAGGGAAGTCTACATTTTCCTGTTTTTGAAGTCCAAAGGAAGAATAAGAACAATGAGTTTAGGTTGAAAGGAACTAAAAATGATGATAACTCAATATCATTGACCTTGCGTATCGCTGATACATGTGATACTGCATTCTCTGTGGCCTCAGAGATGGTAGAACATTTGGAGCTGGCAGATCATGATGTGGCTTTCATAGCTGACCTTATTGATTACTTGATAATGAAACTTCTGCCTTGGTGGAAGCCCTCACCTGATCATAATACCAGTGGAGAATTAAGTCTTTATGGCGGGTCTACAAGTGTAGATAGCCAAACCTTAACGGTATGCCCTTGGGGTTCGTTCCTAACCAGTATTCCCTCTGAATCAGTAATTGGTCAAGATGGCTTCTCTGGGCTCAATACAATTCCTAAAGAAGGTTTTGTGACTGCTGAGAAGAGCTGTGATTTCGAAAATGCTGATAATACTATTTCTGAGGGTAATTATTATTCTTCTCCTAGTTTGGCTGGCTTGGAAGATCAGTTTTCACACGGATCTGGAGCTTCTGAGATAGCTGTTGAAGATGCTTCAATGAAAAATGAAAACTATCTTGATTCCAATGTTAATAGAAGTTTTAAATCCTTAAGTAGGTCCATATCAGAACTTGAACTTGGGGATGCATATTTTGAGGACTGTAAATTGCAGACAGAAGGTTGCTGTGCTGGGGAAGGCATTGTGATAAATGAATTCCCAAAGAACTCAGGGTCAATTCATGGAACATCTAATGGTGTGAGCTTATCAAGTACCTATTCTTCTCTGTCTTCAACAGAAAAGGACATTGATATTGAGCTAAAGCTTGAACTTGATGCAATTGAGTCACAGTATCAGCATTGGATTGAAGAACTTACTAGAATGAAGTTGGAGGCATTGGAAGCCACCAAAAGGAGATGGATGGCCAAGAAGAAAGTAGCTGTTCATTGA 1956 0.3972 MNSGAVLALHPLDNVFRTREPPDFEEDFVEKDPTGRYRGFDEVNGIEVAWNQVKIDGLLHSVDDLAKLYSEVNLLKSLKHENIIKFYNSWIDDKQKTVNMITELFTSGNLRQYRKKHKYVEVKAIKGWARQILQGLVYLHSHRPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTAQSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTLEYPYSECKNPAQIFKKVTSGIKPASLNKVSDPQIKEFIEKCLVPASERLSAEELLKDPFLQVENPKDPNFYPLQSPIKTPRATNMSKSGSPSLSMDIDADYKQLSVSICAESNQGSLHFPVFEVQRKNKNNEFRLKGTKNDDNSISLTLRIADTCDTAFSVASEMVEHLELADHDVAFIADLIDYLIMKLLPWWKPSPDHNTSGELSLYGGSTSVDSQTLTVCPWGSFLTSIPSESVIGQDGFSGLNTIPKEGFVTAEKSCDFENADNTISEGNYYSSPSLAGLEDQFSHGSGASEIAVEDASMKNENYLDSNVNRSFKSLSRSISELELGDAYFEDCKLQTEGCCAGEGIVINEFPKNSGSIHGTSNGVSLSSTYSSLSSTEKDIDIELKLELDAIESQYQHWIEELTRMKLEALEATKRRWMAKKKVAVH 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi840g00020 651 FunFam probable serine/threonine-protein kinase WNK9 105 284 - -
Sebi840g00020 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Sebi840g00020 651 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 37 631 - -
Sebi840g00020 651 MobiDBLite consensus disorder prediction 295 310 - -
Sebi840g00020 651 ProSiteProfiles Protein kinase domain profile. 1 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi840g00020 651 Coils Coil 613 633 - -
Sebi840g00020 651 FunFam Probable serine/threonine-protein kinase WNK1 34 103 - -
Sebi840g00020 651 Gene3D Phosphorylase Kinase; domain 1 23 103 - -
Sebi840g00020 651 SUPERFAMILY Protein kinase-like (PK-like) 37 323 IPR011009 -
Sebi840g00020 651 SMART serkin_6 28 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi840g00020 651 MobiDBLite consensus disorder prediction 290 310 - -
Sebi840g00020 651 Gene3D Transferase(Phosphotransferase) domain 1 105 284 - -
Sebi840g00020 651 Pfam Protein kinase domain 61 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi840g00020 651 CDD STKc_WNK 37 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi840g00020 Sebi-Chr840 307037 310868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi840g00020 25 409 MAP Kinase Kinase Kinase AT1G64630 57.757 5.28e-149 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi840g00020 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi840g00020 K08867 - gmx:100809602 960.674