Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi83g00034 ATGCGATGTGGAAAAAGTTGTCGTTTGAGATGGATAAATTACCTTAGGCCTGATTTGAAGAGAGGGAATTTTACAGAAGAGGAAGAGGAAACTATAATAAGGCTACATGAGGCTTGGGGAAACAAGTATTACCATATTGAAGTTTGGTTCAAAACAAATGATTTCAGGTGGTCAAAGATTGCTTCCAATTTGCCAGGTAGGACAGATAATGAGATCAAGAATGTATGGAACACCCACTTAAAGAAAAGATTGGCTAACAAAAGAAAATCAAGGTCTAGTGTAGATGAATCCAAGCTGAAATCATCTGTAGCATCCTCCTCTTCATCTTCACTTGAATCAAATTTCTCAAATGAGACATCAAATTCAGTTATGACTGCTATTGGTAATGAATCTGATACACAAGCTCCTGAAGTGACAATGATAGAGAAAGATGAGAAACGATCAATGAAACAAGTGTTAGATGAACTTAATGGGGTCTATGAGAACTCAAATGAGTCAGCAAATTCAGTATCTTGGAGTGAGTCAAACACCTTCAATTCAAGCCAGATTCTTGCTTATGAACCAGAACAACAAATGAGTTCTCCATCCAGCAATGTAGGAGCTTATGATGTTGACAATGTGCTGCAAGAGGTGGATGAACTCCAAATTCTTGAAATTCCATTGGATCCAAATTATGATATTGAGAAAATGTTGGATAACATAGGAACCAATCAGTCAGATGTGGTCCAATTACACCAAGTTGATGGTAACCAAACCTCAAATTTTGGGCAAGAGAGTGTTCAAGATATTGAAACTTGGAAGTGGTTACTTGACTCTGAGAGTGATACTGGATTAGGTGCACCAAAGGAGACAAACAACGATATGTTTCAACAAATGAATAATGCAACTGACTCAGGAATGGAGCCTTATTCATATGATTTTGATGCAATGCCAACACCTGAGTCTGATCTTGAACTAGGTTATGTTCAATGGGGGTCTTCTTGGCCTCACAATCCAAGTATTTAA 1005 0.3771 MRCGKSCRLRWINYLRPDLKRGNFTEEEEETIIRLHEAWGNKYYHIEVWFKTNDFRWSKIASNLPGRTDNEIKNVWNTHLKKRLANKRKSRSSVDESKLKSSVASSSSSSLESNFSNETSNSVMTAIGNESDTQAPEVTMIEKDEKRSMKQVLDELNGVYENSNESANSVSWSESNTFNSSQILAYEPEQQMSSPSSNVGAYDVDNVLQEVDELQILEIPLDPNYDIEKMLDNIGTNQSDVVQLHQVDGNQTSNFGQESVQDIETWKWLLDSESDTGLGAPKETNNDMFQQMNNATDSGMEPYSYDFDAMPTPESDLELGYVQWGSSWPHNPSI 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi83g00034 334 PANTHER MYB DOMAIN PROTEIN 55 2 258 - -
Sebi83g00034 334 CDD SANT 56 80 IPR001005 -
Sebi83g00034 334 MobiDBLite consensus disorder prediction 83 119 - -
Sebi83g00034 334 Pfam Myb-like DNA-binding domain 21 80 IPR001005 -
Sebi83g00034 334 SUPERFAMILY Homeodomain-like 2 85 IPR009057 -
Sebi83g00034 334 SMART sant 20 82 IPR001005 -
Sebi83g00034 334 Gene3D - 23 84 - -
Sebi83g00034 334 Gene3D - 1 20 - -
Sebi83g00034 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 84 IPR017930 -
Sebi83g00034 334 ProSiteProfiles Myb-like domain profile. 16 80 IPR001005 -
Sebi83g00034 334 MobiDBLite consensus disorder prediction 97 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi83g00034 Sebi-Chr83 1770706 1771781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi83g00034 1 232 MYB Transcription Factor Family AT1G79180 43.590 1.88e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi83g00034 Myb_DNA-binding 9.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi83g00034 K09422 - gmx:100805511 278.485