Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi83g00008 ATGAAATTTAGAGTTAATAACTTGCAGGACGTTAAAGAGATGGAGTTTTTCACTGAGTATGGGGATTCCAACAGATACAAGATCCTTGAGATTATAGGGAAGGGTAGCTATGGAGTTGTTTGTGCAGCAATTGACACGCACACTGGGGAAAAAGTTGCAATAAAGAAGATTCATGATGCCTTCGAGCATATTTCTGATGCCATTAGAATCCTCCGTGAAGTCAAGTTGCTAAGGCTTTTAAGACACCCTGATATTGTGGAGATTAAGAGAATCATGTTACCACCTTCAAAGAGGGAGTTTAAAGATATTTATGTAGTCTTTGAGCTCATGGAGTCTGATCTTCACCAAGTCATCAAAGCTAATGATGACTTGACCCGTGAACACCATCAGTTTTTCCTTTATCAGATGTTACGTGCATTGAAGTATATGCATACAGCTAATGTGTATCACAGAGATCTTAAGCCCAAGAATATATTGGCAAATGCAAACTGCAAGCTCAAAGTTTGTGATTTTGGGCTGGCTAGAGTTGCATTCAATGATGCCCCAGCTACAATATTTTGGACTGATTATGTTGCTACAAGATGGTATAGAGCACCAGAGCTGTGTGGATCATTCTTTTCTAAGTATACACCAGCAATTGATATATGGAGCATTGGATGCATATTTGCCGAGGTGCTGATGGGAAAGCCATTGTTTCCCGGTAAAAGTGTTGTGCATCAGTTAGATTTGATTACGGATCTTCTTGGGACACCATCATCTGAAACTATTACAGGAGTTCGAAATGATAATGCAAAGAAGTACTTAATGGGAATGCAGAAGAAATCTCCTGTGCCATTTGAGCAGAAATTTCCAAATGTTGATCCATTGGCACTTCGCCTTCTACAAAGGCTTCTAGCATTTGATCCAAAGGATCGACCAACTGCTGAAGAGGCACTGGCTGATCCTTACTTCAAGGGCTTGGCCAAAGTCGAGAGAGAACCTTCGTGTAAGCCAATTTCAAAATTGGAATTTGAGTTTGAGAGGAGAAGGATGACAAAGGATGATGTTAGAGAACTAATGTATCGGGAAATACTGGAGTATCATCCTCAACTACTCAAAGATTACATGAATGGAACTGAAGGCGCAAACTTCCTCTATCCTAGTGCAATAGATCAATTCAGAAAACAATTTGCTTATCTTGAGGAAAATCATGGTAAAAGTGGGCCAGTGCTTCCTCCAGAAAGAAAGCATGTCTCCCTTCCAAGGTCCACTGTTCACTCTAGTACAGTTTCTCCTAGTACCCAGTCAACCCATGTTTTATATGAGAACAAACAGATTGTAGAAGAGGCATCTAAGAGTTTGAGAGCAGCAGGATCAAATCCTGGAAATCAATTAAGGGGTGTACAACCTCCACCACAGGGGAGGGAGGAGGGCAATGAAGAATCTAATAGAAGCAAGAAAGCTAAACCAGGGAGAGTTGTAGGGCCAGTTCTACACTATGAAAATCAGAGAATCATAAAAAATTCTAATAACCCCAGGATCGTTTACCAAAATACTCCTCAAGCAGTCTCGATGCAGAGTCTCTTTAGGGTTCATCCCCCAAACCCAAAGGCTACATCAGATATACACAAGGACTTTTCACAAGGCAAGAATCAACTCCCATCCCAACAGTCTAACTTACAAGCCAGACCAACCACTGATCACAACACCAACCCATACTGCCAACAAGGCAAGAACAATAACGTAAATGAACCTGTAACAGCCATTGATGCAAAACTGCTGCAGGCACAATCTCAATTTGGCGCAGTTGGTGCTGCAGCAGTAGCCGTTGCCAATCACAGTCACAGGTATTCAAGGGGCATTCAGTATGGTTTGTCATAG 1860 0.4156 MKFRVNNLQDVKEMEFFTEYGDSNRYKILEIIGKGSYGVVCAAIDTHTGEKVAIKKIHDAFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDAPATIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKSVVHQLDLITDLLGTPSSETITGVRNDNAKKYLMGMQKKSPVPFEQKFPNVDPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCKPISKLEFEFERRRMTKDDVRELMYREILEYHPQLLKDYMNGTEGANFLYPSAIDQFRKQFAYLEENHGKSGPVLPPERKHVSLPRSTVHSSTVSPSTQSTHVLYENKQIVEEASKSLRAAGSNPGNQLRGVQPPPQGREEGNEESNRSKKAKPGRVVGPVLHYENQRIIKNSNNPRIVYQNTPQAVSMQSLFRVHPPNPKATSDIHKDFSQGKNQLPSQQSNLQARPTTDHNTNPYCQQGKNNNVNEPVTAIDAKLLQAQSQFGAVGAAAVAVANHSHRYSRGIQYGLS 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi83g00008 619 Pfam Protein kinase domain 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi83g00008 619 MobiDBLite consensus disorder prediction 415 431 - -
Sebi83g00008 619 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Sebi83g00008 619 SUPERFAMILY Protein kinase-like (PK-like) 22 321 IPR011009 -
Sebi83g00008 619 Gene3D Phosphorylase Kinase; domain 1 41 363 - -
Sebi83g00008 619 SMART serkin_6 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi83g00008 619 Gene3D Transferase(Phosphotransferase) domain 1 112 340 - -
Sebi83g00008 619 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi83g00008 619 MobiDBLite consensus disorder prediction 397 431 - -
Sebi83g00008 619 FunFam Mitogen-activated protein kinase 341 363 - -
Sebi83g00008 619 MobiDBLite consensus disorder prediction 534 563 - -
Sebi83g00008 619 MobiDBLite consensus disorder prediction 449 487 - -
Sebi83g00008 619 FunFam Mitogen-activated protein kinase 15 120 - -
Sebi83g00008 619 MobiDBLite consensus disorder prediction 530 563 - -
Sebi83g00008 619 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Sebi83g00008 619 CDD STKc_TDY_MAPK 25 362 - -
Sebi83g00008 619 FunFam Mitogen-activated protein kinase 112 340 - -
Sebi83g00008 619 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 25 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi83g00008 Sebi-Chr83 147003 153273 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi83g00008 9 594 MAP Kinase Gene Family AT1G53510 67.822 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi83g00008 Pkinase 1.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi83g00008 - - gmx:100800878 954.125