Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi838g00014 ATGGAAGATTCAGCACCAAAGTCTCTGATGGAGAACCTGTTAGGCCTTCTGAGGGTTCGCGTCAAGCGTGGCGTCAACCTTGCCGTTCGTGATGTTCGTAGCAGCGATCCTTATGTTGTTCTCAAGATGTATAACCAGAAACTTAAGACTCGTGTGATTAAAAAGGATGTTAATCCTGAGTGGAATGAAGACCTTACGCTTTCTATCATAGATCCTAATCACTCAGTATTGCTGACTGTGTATGATCATGACACTTTTAGTAAAGATGACAAAATGGGAGATGCAGAATTTGAAATCTTTCCCTTTATTGAAGCCTTGAAGATGAATGTAACTGGCCTTCCAAATGGTACTGTGGTCAAAAGAATACAACCAAGCAGGCAAAACTGCCTGGCAGATGAGAGCTGTATCTATTATAGCAATGGCAAAATTATCCAAGATATGATCCTTAGATTGAGAAATGTGGAATGTGGTGAAGTGGAAATCCAATTGCACTGGATTGATCTTCCTGGTTCTAAGGGTTTATGA 525 0.4076 MEDSAPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVLKMYNQKLKTRVIKKDVNPEWNEDLTLSIIDPNHSVLLTVYDHDTFSKDDKMGDAEFEIFPFIEALKMNVTGLPNGTVVKRIQPSRQNCLADESCIYYSNGKIIQDMILRLRNVECGEVEIQLHWIDLPGSKGL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi838g00014 174 SMART C2_3c 16 111 IPR000008 -
Sebi838g00014 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 12 172 IPR044562 -
Sebi838g00014 174 Pfam C2 domain 15 99 IPR000008 -
Sebi838g00014 174 ProSiteProfiles C2 domain profile. 1 115 IPR000008 -
Sebi838g00014 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 100 IPR035892 -
Sebi838g00014 174 CDD C2_ArfGAP 14 157 - -
Sebi838g00014 174 Gene3D C2 domain 11 172 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi838g00014 Sebi-Chr838 252666 254554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi838g00014 47 174 C2H2 Transcription Factor Family AT1G70790 62.308 2.21e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi838g00014 - - gmx:100810504 314.694