Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi838g00010 ATGGACGAAGGTGACGGCCAGATATCTGACACGGAGACAATGATGTATAGTGAAGACTTTACTCAGTGTACGAATGATGATTCTGTTAGCAATGGAGAGAGAGGTGAAGAAGGTGAAGATGGAGTTCCGTTGATCGAAGGTGGTGATGATGAAGATAGTGAGGAAAGTGGTGATGAAAATGAATCTGGGGATAAATATAGGATTGATGGAGTTGCATTTGAGTTCTATAATAAGTATGCTCAGAAAAGAGGATTTGCTACTAGAAAATGGAACACAGTTGTAAACAAGGAAGGTAGAGTGTCACAACAAACATTTGTGTGTTTCAGAGAGGGATATCGATTGAAAAAACACTTGAAAAACGAGAATCGTAAGAGGGAGGCGAGAGCAATTACTAGGTGTGGTTGTTTTGCATTTTTGAAAGTTCGATATGCTAGAGATATAAGTCGTTGGATTGTAAAAGCTTTCTCTGATGAGCATAGTCATGAGTTGTTACCTAGGAAATACGAGGGAATGTTGACTTCACACCGAAAGATGAATGAAACAGACATAATGCAAATGAATGCCATGCGTGAAGTTGGTATAGGTGTTACACAAATATATGGGTTAGTGGCAAATCAATCAGGAGGCTATAAAAATGTTGGTTACCGTAAAAGTGATATGTACAATGAAATTTTTAAACAAAGAAGATCTGAGGGTAGTGATGCCAGAGGTGATTATGAGGTTGGGAGATTTAGAACGAAATGGGAGGAGCTGATTTGTGAGTTTGGTTTGCAGAGCAACCAATGGGTCAGTGAACTGTACAATAAGAAGAAAATGTGGGCTACTGCCCATATACGTGGTAGCTTCTTTGCTGGCTTCAGGACGACCTCTAGGTGTGAGGGCCTTCACTCTCAAGTAGGTAGATATGTTCATTACCGAAATAACTTGAGAGAGTTCTTGAGGCACTTTTTCCAATATTTGGCTTATACTAGGCAGAAAGAGTTGGAGGCTGACTTTGAATCAATAAATGGAGATCCTGTTCTACAAACACCTTTTGATGATATTGAAGCATCTGCGGCAAAGTTGTATAGTAGGAAGGTCTTTATGAAGTTTAGAGTCGTGCTTTGGCGGGCATGTAAGCTGAAGGTTAGTGGATGTGAGCGGACCCCAAACTGTCACATATATATTGTGACAAACAGATCAAGATGTGGAAGAGAGTGGCATATGTCATATGTGGCACAAAATGAAGAAGTCAAGTGTTCTTGTCAGCGGATGGAGTCAATGGGTATCCCATGTGAGCATATTGTTGTTCTTTTACATTACCTCGATATAAAACAATTGCCAAATTCACTTATTTTAGAAAGGTGGACAAAATATGCCAAGCAATCTGTGGATGGTGCTGATTTGGGAACTAGTAGTTTTGGTGGTTCTATGTGGAAGAGTCAAGTGATATCATTGTTGTTTGATTGTTATGAGATGTGCAGACTTGCGGGTAAAAGGATGGACAAATTGGAGGAAACAAGAGGAGTTATTAGGAATCATTTGCAAAGTTTGAAAGTTAATGAAGAAGATGGAAACAATGATGAAGGTAATGATCAGGAAGGGGATGACATTAACCTGAGGGATCCTTCACATGTCAGAAGTAAAGGTTGTGGATCGAGGCAGTCTACAGGTGGAAGTAGAGGCAATAGGAGGACCACTACATGCAGTGTATGCCAAGGTCGTGGTCACAACAAACAGACCTGTCAACTTCGTAGAAGGCACGCACATCCAGAGACAAATGAAACAGCAGGTAGTGGAGATGACATGAATGAGTAA 1797 0.4046 MDEGDGQISDTETMMYSEDFTQCTNDDSVSNGERGEEGEDGVPLIEGGDDEDSEESGDENESGDKYRIDGVAFEFYNKYAQKRGFATRKWNTVVNKEGRVSQQTFVCFREGYRLKKHLKNENRKREARAITRCGCFAFLKVRYARDISRWIVKAFSDEHSHELLPRKYEGMLTSHRKMNETDIMQMNAMREVGIGVTQIYGLVANQSGGYKNVGYRKSDMYNEIFKQRRSEGSDARGDYEVGRFRTKWEELICEFGLQSNQWVSELYNKKKMWATAHIRGSFFAGFRTTSRCEGLHSQVGRYVHYRNNLREFLRHFFQYLAYTRQKELEADFESINGDPVLQTPFDDIEASAAKLYSRKVFMKFRVVLWRACKLKVSGCERTPNCHIYIVTNRSRCGREWHMSYVAQNEEVKCSCQRMESMGIPCEHIVVLLHYLDIKQLPNSLILERWTKYAKQSVDGADLGTSSFGGSMWKSQVISLLFDCYEMCRLAGKRMDKLEETRGVIRNHLQSLKVNEEDGNNDEGNDQEGDDINLRDPSHVRSKGCGSRQSTGGSRGNRRTTTCSVCQGRGHNKQTCQLRRRHAHPETNETAGSGDDMNE 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi838g00010 598 MobiDBLite consensus disorder prediction 542 572 - -
Sebi838g00010 598 PANTHER OS01G0519700 PROTEIN 61 236 - -
Sebi838g00010 598 MobiDBLite consensus disorder prediction 42 59 - -
Sebi838g00010 598 MobiDBLite consensus disorder prediction 1 64 - -
Sebi838g00010 598 ProSiteProfiles Zinc finger SWIM-type profile. 404 436 IPR007527 GO:0008270
Sebi838g00010 598 MobiDBLite consensus disorder prediction 512 598 - -
Sebi838g00010 598 MobiDBLite consensus disorder prediction 10 29 - -
Sebi838g00010 598 MobiDBLite consensus disorder prediction 527 541 - -
Sebi838g00010 598 SMART 26again6 411 438 IPR006564 GO:0008270
Sebi838g00010 598 Pfam SWIM zinc finger 407 435 IPR007527 GO:0008270
Sebi838g00010 598 Pfam FAR1 DNA-binding domain 74 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi838g00010 Sebi-Chr838 205834 208321 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi838g00010 FAR1 1.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi838g00010 - - tpra:123913749 294.664