Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi837g00007 ATGGGTGGTGTTGCATGGACAGAAGAGGAAGATCACTTGCTCAAGAAATGCATACAACAATATGGAGAAGGAAAGTGGCATCGTGTTCCTCTATTGGCTGGTCTAAACAGGTGCAGAAAGAGTTGTAGGCTAAGGTGGCTGAACTATCTCCGTCCTAACATCAAGAGAGGAAATTTTGATGAGGAAGAAGTGGAAATGATTGTCAAACTTCACAAATTACTAGGCAACAGGTGGTCACTGATTGCAGGAAGGTTGCCAGGAAGGACTGCTAATGATGTGAAAAACTATTGGAACTGTCATCTGAGTAAAAAATTAAATGCTCTAGAAGCTGAAGATAATGGACAAATAACCAAAGATGTTCAAGTCATTAGGCCCCAGCCTAGAAACATTGGTTCAAGCTCAGTAAAGAGAAGGTGCCAGCAGAGTGAGTCTCCAACTGAACAAGGGGTTCAACAAGAGAGTGGTGTGACATTTGATGCTGATGGACTGAACCATATGCTTGATTCACAGCAAGAGAATATGTATTCATACTTTGATCAACAGGGCATGGTTGGTGAGTTTCCAATGGACTTCCAATTAGAAGGATTTGAAGCAATGATAAATGGAGATCAAGGTAGTAGCAGCCAATGGAATTGGGATGATATGCTCTTAGACATGGATCTGTATAATGATTTTTCTTATTAG 684 0.4094 MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGNFDEEEVEMIVKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLNALEAEDNGQITKDVQVIRPQPRNIGSSSVKRRCQQSESPTEQGVQQESGVTFDADGLNHMLDSQQENMYSYFDQQGMVGEFPMDFQLEGFEAMINGDQGSSSQWNWDDMLLDMDLYNDFSY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi837g00007 227 Pfam Myb-like DNA-binding domain 56 98 IPR001005 -
Sebi837g00007 227 Pfam Myb-like DNA-binding domain 5 50 IPR001005 -
Sebi837g00007 227 FunFam Myb transcription factor 3 55 - -
Sebi837g00007 227 Gene3D - 58 124 - -
Sebi837g00007 227 Gene3D - 4 55 - -
Sebi837g00007 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Sebi837g00007 227 SMART sant 2 52 IPR001005 -
Sebi837g00007 227 SMART sant 55 103 IPR001005 -
Sebi837g00007 227 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Sebi837g00007 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Sebi837g00007 227 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 152 - -
Sebi837g00007 227 ProSiteProfiles Myb-like domain profile. 6 50 IPR001005 -
Sebi837g00007 227 MobiDBLite consensus disorder prediction 129 153 - -
Sebi837g00007 227 SUPERFAMILY Homeodomain-like 5 97 IPR009057 -
Sebi837g00007 227 CDD SANT 58 101 IPR001005 -
Sebi837g00007 227 CDD SANT 5 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi837g00007 Sebi-Chr837 140627 141921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi837g00007 5 131 MYB Transcription Factor Family AT1G66370 60.584 2.40e-56 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi837g00007 Myb_DNA-binding 9.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi837g00007 K09422 - gmx:100809746 363.229