Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi837g00004 ATGTTCCGTTATGGGCTTCTTGATGAGATTCAGAACAAGCTCGATTACGTCCTCTCTCTTACCGTCGAGAATTTCCTCGAGCGCTGTCTTCAGACCCTTGTCTTCAAATCTGGCATGGCCAAGTCCATCCACCATGCTAGGGTTCGTCACAGGACACAGATTTCTGCGACTCCAAACTCCCTCTTAGGTGCCACTTTTCTCTTTGTTGCCATCGGAAATAGCCCAACGCAAGGTTGGTATTCCAGTCTTTGTGACTGGGTGAATTGGGGGAGACATGGAGGGTCAATCAGGGTGAAGGTAGCTTCAGAGGTTTCTGAAGCATTATCACTTGGGAGTCTAGTTGTTGCTCTGGAATCTACCATCATTTCACATGGGATGCCATATCCTCAAAATTTGGAAACTGAAAAATAG 411 0.4672 MFRYGLLDEIQNKLDYVLSLTVENFLERCLQTLVFKSGMAKSIHHARVRHRTQISATPNSLLGATFLFVAIGNSPTQGWYSSLCDWVNWGRHGGSIRVKVASEVSEALSLGSLVVALESTIISHGMPYPQNLETEK 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi837g00004 136 PANTHER 30S 40S RIBOSOMAL PROTEIN 1 48 IPR022801 GO:0003735|GO:0015935|GO:0019843
Sebi837g00004 136 Gene3D Indigoidine synthase domain 95 136 IPR022830 GO:0004730
Sebi837g00004 136 Pfam Indigoidine synthase A like protein 103 135 IPR007342 GO:0004730
Sebi837g00004 136 SUPERFAMILY Indigoidine synthase A-like 99 134 IPR022830 GO:0004730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi837g00004 Sebi-Chr837 116272 117009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi837g00004 1 48 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 89.583 2.79e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi837g00004 K02997 - gmx:100810569 90.8929