Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi834g00003 | ATGCGTAAAGAATCAGAGGTTGGGATGGATTATGATGATGCAGAAGATATTCTTCCTGCAGAAACTGGGCCAAGAAAAGTCAATGCAAGATATGCCAAGACTTCATTTTGTGAGGATAAAGAAGCTATGAAATTTGTTTCAGCATCAAATGCTGTGAACCAGCCTGGTAACTCTATTTCATATGTTAAAAATACAGAGAGCACTGAGGGTGGTGATGTTGATAGAAATGGAGATGATTGTTGCCTCTGTGGTATGGATGGAAACCTGCTTTGCTGTGATGGTTGTCCCTCTGCTTATCATACTAGGTGTATTGGTGTGATGAAAGTGCAAATACCAGGAGGATCATGGCTCAATGTTGACAAAGATGAATTTCATCTTAAATATTACAATCAGAATGACATTCCTAAAGTGATCCAAGTACTCTATGAATCCATGCAGCATAGACCAATATACTATGGTATTTGCATGGCAGTGCTACGATATTGGAGTATTCCAGAAAATTTCTTACCTCTTTCTGTTTCAGCTGGAATAAATGTAAACCCAACAAATATTAAGGAAGAGGCAAAATTCTCTACTTCATTACTTCCTCCTCTAAGTGAAGACAACCAAAAACCTGTTAGTTTGGTGAAGGGAGAATACCCTCCAACTGACAGTGATAATATGGTGCCGCAACTTGATGCTTCATCAGTTATCACTCAAAGTCCTGCTCCTGAAAGCAGTGACAATGCTAGTAGTAAAGAGTGCCCTACTGTGGATATGAAGCTTCCTGAGGAAACCAGGACTGAGTCAGTCATTTCAGCTGGTTCTGGTTCTGTTTCTGTGAGTCATCAGTCTGACATACACTATCACAATTCTGTTAATATGTCAACTGCAGCTGATCCTGCTAAATGCTCTTTGGTAAACAGCTGGTTTAGTAATAATGGTCATGCAAATGATATGGGGTTGCCTATGAATTTTTCTTTGCAAACCAAAGAAAACACCCAAGGCGGTTTTGGAAAGTGTGAACTCAATGTAACTAGCGATTTTGGGTACATGGGTTCCTCCTATAAACCTCTGTCTTACATAAATTACTATATGCATGGTGATTTTGCTGCATCAGCAGCTGCTAAACTTGCCATTCTTTCTTCAGAGGAATCTAGGTCAGAGGGTCATGTGTCAGACAATCAGAGGAAAACTGCATCTGCAATCACTTATCTTCAAGCAAAAGCATTCTCACTAACAGCTTCACGCTTCTTTTGGCCCAGTTCTGAGAAGAAGCTTGTAGAGGTTCCAAGAGAGAGGTGTGGCTGGTGCTTTTCTTGTAAAGCCCCTGTTTCTAGCAAAAGAGGATGCATGTTAAATCATGCTGTTATAAGTGCCACAAAAAGTGCTACAAAAATCCTTGCTGGTTTTTCTCCCTTAAGGAGTGGAGAGGGAATTCTTCCTAGCATTGCAACTTACATTATATACATGGAGGAATGTTTACACGGTTTAATAGTTGGGCCCTTCCTAAATGCAAGCTATAGAAAGCAATGGCGTAAGCAAGTGGAACAAGCTACAACATTTAGTGCTATCAAACCGCTTTTACTTAAACTTGAGGAGAACATTCGAATCATTGCCTTTTCTGGGGACTGGGTTAAGCTGATGGATGATTGGTCAGTTGAATTTCCCATGATACAAAGTGCTGCATCTACTCTTGGAACAACTCAGAAACGTCCACCAAGTGGGAGGCGTTACAAGAAGAGGTCATCTGTTGATGAAGCTACAACTGATGGTTGCCATGAAAACTTTGTGTGGTGGCGTGGTGGCAGATTTGCTAAATTTATATTCCAGAAAGCGACATTGCCAAAATCCATGGTCAGAAAAGCAGCTCGCCAAGGTGGTTTGAAAAAAATTGCTGGTATTTTCTATGCTGATGGCTCTGAAATTCCTAAAAGAAGCAGGCAACTTGTTTGGAGATTTGCAGTCCAATTGAGCAGGAATGCATCACAGCTAGCACTTCAGGTCAGATATCTAGATTTTTACCTCAGATGGAGTGATCTAATTCGTCCCGAGCAGAACATCCAGGATGGAAAAGGTCAAGAGACTGAAGCTTCTGTTTTCAGAAATGCAAATATTTGTGACACAAGATTTGTAGAGGGAAAAAGTTGTTATGGAATAGCTTTTGGGAGCCAAAAGCATCTTCCTTCTCGGGTGATGAAAAATGTTGTTGAAATAGAGCAAGGTGCAGAAGGAAAGGAGAAGTATTGGTTTTCTGAAACACGCATTCCTTTATACTTGATAAAAGAATATGAAGAAGCTAATGAAAAAGTTTCATGTGATGAAGAGCACTATAGTGATGCATTTCCGTTGCACAGAAGGCGATTGAAAGTTACCTGCAAGAACATATTTTATTACCTTACCTGCAAGAGAGACAACTTGGACATATTCTCATGTTCTGGATGTCAGATGGATGTTTCAATTCGGTATGCTCACAGGTGTGGTGCATGTCAAGTCTCTACAAACAAGGAATTTGGGTACATGACCACATGCAAACAGTGTTACCATGCCATGTTACTTGCTCCAAAAGGGACTAATAATGAATCTCCAACCAGTCCCTTACTCTTACAAGGTCGAGAAAATGGCTCTGGGACTGTTTCTAATGGACCGAGGACAAAGGCTAGTCATCCTGACATGAAACAAGCTACTTCAGTGACAGTTTTGAAGGGACCAAGGCCTAAACGTCATGATCAAACACCGAAAACTACCAGGATAAAGAATAGCCATCCTGGAACAAAACAAGTTGCTTCTGATTCTGCAAAAAGCCGTCGCAAGAATTGTTCTTGGGGTCTTATATGGAAAAAGAAAGGTAATGAAGATATTGACATTAATTTTAGGACCAAAAACATACTTTTAAAGGGTGGATCTGGGATGCCTCAATCGTGTTTGGAACCACCTGTTTGTCACTTGTGCCGCAAGCCATATAGGTCTGATCTAATGTATATTCGCTGTGAGACATGCCAAAATTGGTATCATGCTGAAGCTGTTGAACTTGAAGAATCCAAAATTCTGGATTTATTGGGCTTCAAATGTTGCAAGTGTCGTAGGATAAAATCACCTGTATGTCCTTACTTTGAGCCTAAGGAGGGTAAGAAATCACACACAAGGGCTTCAAAGAAAGAGCATTCAGGAGCAGATTCTGATTCTGGAACATTTACTGATATGAAAGAGCGTGAACCTGCTACTCCCGTCTTTCCTGTGGAGGACGATCCTTTACTTTTCTCTCTTTCAAGTGTTGAGCTGATTACAGAACCTAAGTTAGATGTGGATGCTGAGTGGAACACTGTCTCTGTGCCTGGGCTTCAGAAACTACCAGTGAGAAGGCATGTTAAGCGTGAGGGGGATGGTGATGGTTCTGTTGGAGGTATACCTTTAGATGCTGAATTCTCAACACACAATGAAGCAGGTAATCTGTCCAAATCTGCAGATTCATTATCACCTTTAGAATATGACCCTGCTATGCACTTTGACAGCAATTTACTGAACAACTCTGAAAGTCTAAATTATGAATGCATGGAGTTTGAACCCCATACCTACTTCTCTTTAACGGAACTGCTGCACCCAGATGATGGTAGCCAGTTTGAGGGAGTTGATGTGTCTGGGGACTTGTCAGGATATTTGGGAAGTTCTGGTACCCTTGTTCCTGAAAAATGTGGAGGTGTTAGTTCAATCGATAAATCAGAACCTGCAATTTCCTTACAAGATAGTGATTATAGTTGTCAGAAATGTTCACAAATGGATCCAGTCCCTGATCTCTGTTGTAAGTTTTGTGGGATTTTGTTTCACAGCCAATGTTCACCTTGGGTGGAATCACCATCTGGGCTTGGAAATTGGAGGTGTGGGAATTGCCGGGAATGGCAATAG | 3882 | 0.4104 | MRKESEVGMDYDDAEDILPAETGPRKVNARYAKTSFCEDKEAMKFVSASNAVNQPGNSISYVKNTESTEGGDVDRNGDDCCLCGMDGNLLCCDGCPSAYHTRCIGVMKVQIPGGSWLNVDKDEFHLKYYNQNDIPKVIQVLYESMQHRPIYYGICMAVLRYWSIPENFLPLSVSAGINVNPTNIKEEAKFSTSLLPPLSEDNQKPVSLVKGEYPPTDSDNMVPQLDASSVITQSPAPESSDNASSKECPTVDMKLPEETRTESVISAGSGSVSVSHQSDIHYHNSVNMSTAADPAKCSLVNSWFSNNGHANDMGLPMNFSLQTKENTQGGFGKCELNVTSDFGYMGSSYKPLSYINYYMHGDFAASAAAKLAILSSEESRSEGHVSDNQRKTASAITYLQAKAFSLTASRFFWPSSEKKLVEVPRERCGWCFSCKAPVSSKRGCMLNHAVISATKSATKILAGFSPLRSGEGILPSIATYIIYMEECLHGLIVGPFLNASYRKQWRKQVEQATTFSAIKPLLLKLEENIRIIAFSGDWVKLMDDWSVEFPMIQSAASTLGTTQKRPPSGRRYKKRSSVDEATTDGCHENFVWWRGGRFAKFIFQKATLPKSMVRKAARQGGLKKIAGIFYADGSEIPKRSRQLVWRFAVQLSRNASQLALQVRYLDFYLRWSDLIRPEQNIQDGKGQETEASVFRNANICDTRFVEGKSCYGIAFGSQKHLPSRVMKNVVEIEQGAEGKEKYWFSETRIPLYLIKEYEEANEKVSCDEEHYSDAFPLHRRRLKVTCKNIFYYLTCKRDNLDIFSCSGCQMDVSIRYAHRCGACQVSTNKEFGYMTTCKQCYHAMLLAPKGTNNESPTSPLLLQGRENGSGTVSNGPRTKASHPDMKQATSVTVLKGPRPKRHDQTPKTTRIKNSHPGTKQVASDSAKSRRKNCSWGLIWKKKGNEDIDINFRTKNILLKGGSGMPQSCLEPPVCHLCRKPYRSDLMYIRCETCQNWYHAEAVELEESKILDLLGFKCCKCRRIKSPVCPYFEPKEGKKSHTRASKKEHSGADSDSGTFTDMKEREPATPVFPVEDDPLLFSLSSVELITEPKLDVDAEWNTVSVPGLQKLPVRRHVKREGDGDGSVGGIPLDAEFSTHNEAGNLSKSADSLSPLEYDPAMHFDSNLLNNSESLNYECMEFEPHTYFSLTELLHPDDGSQFEGVDVSGDLSGYLGSSGTLVPEKCGGVSSIDKSEPAISLQDSDYSCQKCSQMDPVPDLCCKFCGILFHSQCSPWVESPSGLGNWRCGNCREWQ | 1293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi834g00003 | 1293 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 58 | 125 | IPR013083 | - | |
Sebi834g00003 | 1293 | PANTHER | PHD FINGER FAMILY PROTEIN | 34 | 116 | - | - | |
Sebi834g00003 | 1293 | MobiDBLite | consensus disorder prediction | 221 | 247 | - | - | |
Sebi834g00003 | 1293 | MobiDBLite | consensus disorder prediction | 195 | 262 | - | - | |
Sebi834g00003 | 1293 | MobiDBLite | consensus disorder prediction | 559 | 578 | - | - | |
Sebi834g00003 | 1293 | SMART | PHD_3 | 1245 | 1290 | IPR001965 | - | |
Sebi834g00003 | 1293 | SMART | PHD_3 | 973 | 1021 | IPR001965 | - | |
Sebi834g00003 | 1293 | SMART | PHD_3 | 79 | 117 | IPR001965 | - | |
Sebi834g00003 | 1293 | SUPERFAMILY | FYVE/PHD zinc finger | 968 | 1027 | IPR011011 | - | |
Sebi834g00003 | 1293 | MobiDBLite | consensus disorder prediction | 1033 | 1062 | - | - | |
Sebi834g00003 | 1293 | MobiDBLite | consensus disorder prediction | 852 | 888 | - | - | |
Sebi834g00003 | 1293 | SUPERFAMILY | FYVE/PHD zinc finger | 50 | 117 | IPR011011 | - | |
Sebi834g00003 | 1293 | Gene3D | Cupin | 970 | 1078 | - | - | |
Sebi834g00003 | 1293 | MobiDBLite | consensus disorder prediction | 852 | 928 | - | - | |
Sebi834g00003 | 1293 | MobiDBLite | consensus disorder prediction | 1033 | 1061 | - | - | |
Sebi834g00003 | 1293 | SUPERFAMILY | FYVE/PHD zinc finger | 1240 | 1291 | IPR011011 | - | |
Sebi834g00003 | 1293 | MobiDBLite | consensus disorder prediction | 910 | 928 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi834g00003 | Sebi-Chr834 | 184219 | 194165 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi834g00003 | 2 | 1293 | PHD Transcription Factor Family | AT5G35210 | 39.072 | 0.0 | 810 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi834g00003 | - | - | lang:109351702 | 1756.11 |