Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi832g00011 ATGTATTCCAAGAGAGAGAACAAGGAGGTTGGAAAGGCAGAGCAACGTTATGTGGAAACAGATCCAACTGGTCGCTATGGCAGGTTTGGAGATGTTCTTGGAAAAGGTGCAATGAAGACAGTGTACAAAGCAATTGATGAGGTGCTTGGAATAGAGGTAGCATGGAACCAAGTCAGACTAAATGAGGTTCTTAACACCCCAGATGATTTGCAACGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCACCAGTCCATCATACGATTTTATACCTCTTGGATTGATGTTGATAACAAGGCCTTCAACTTTGTTACAGAAATGTTCACATCAGGATCATTGAGAGAATACCGGAAGAGATATAAGCGAGTCAGCATACAAGCAATAAAGAGTTGGGCTCGCCAAATCTTACAGGGTCTTGTTTATCTACATGGCCATGATCCACCTGTGATCCATAGGGACCTCAAATGTGATAACATATTTGTCAATGGCCATCTAGGACAAGTGAAAATTGGTGATCTGGGACTAGCTGCAATTCTTCATGGTTCCCATTCAGCTCACAGTGTTATAGGCACCCCTGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTATTGGAAATGCTTACATCTGAATATCCATATAGTGAATGTTCTAATCCAGCACAGATCTACAAGAAAGTGACATCGGGAAAGCTACCAATGGCGTTTTTCCGCATTGAAGACATGGAAGCACAGAAGTTTATTGGAAAATGCCTAGTACCTGCAGAAAAGAGACCATCAGCAAAAAATTTGTTGCTTGACCCTTTTCTTGTGTCTGATGATTCATCTTCTACAACTAAGTTTATTCAGAAGCCATTCTTGAATGATAGTGAGATGGAAAAATTGCATTTGAGTGATGATCTTCCTAGGACTGAAATGAAAGTAATAGGAAAGCTGAATCCTGAGGATGATACTATCTTTCTCAAAGTGCAAATTTCTGATAAGAATGGTTCTGTTAGGAATGTATTTTTTCCCTTTGACATTCTCACTGACACCCCCATTGATGTTGCAACGGAGATGGTAAAAGAGTTGGAGATTGTTGATTGGGATCCTTTTGAAATTGCAAATATGATTGATAGAGAGATATCTGCTCTGCTACCACATAGAAGGAAAAATAACTATTCAGATGCTTTCCACACATTCAGTTATCAAGATGATGATGATGAACCTCATCATCATTTCCACTCATTCTCTTCTTGTTCATCATTACAAGAACCAATACCAGATTTAATCAGTAAATCTGAGGAAATATCAGGTGGATATTATTGGCTCCATGATGATTTGCGTGATGATACCAGCTCAAGATGCTCATCACAAGGGACATATTCCAACTTGAATTACTATTCTGTAGATGACCAAGAATACAATGTGGCTTCTATCAAAAAAGATAAGCTTTCCATCATAAAGAGTCACAAAGGCACAAGGTTGAGCTATTAG 1521 0.3938 MYSKRENKEVGKAEQRYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEVLNTPDDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNKAFNFVTEMFTSGSLREYRKRYKRVSIQAIKSWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSHSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQKFIGKCLVPAEKRPSAKNLLLDPFLVSDDSSSTTKFIQKPFLNDSEMEKLHLSDDLPRTEMKVIGKLNPEDDTIFLKVQISDKNGSVRNVFFPFDILTDTPIDVATEMVKELEIVDWDPFEIANMIDREISALLPHRRKNNYSDAFHTFSYQDDDDEPHHHFHSFSSCSSLQEPIPDLISKSEEISGGYYWLHDDLRDDTSSRCSSQGTYSNLNYYSVDDQEYNVASIKKDKLSIIKSHKGTRLSY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi832g00011 506 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 433 - -
Sebi832g00011 506 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Sebi832g00011 506 SUPERFAMILY Protein kinase-like (PK-like) 28 321 IPR011009 -
Sebi832g00011 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Sebi832g00011 506 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Sebi832g00011 506 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi832g00011 506 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi832g00011 506 CDD STKc_WNK 25 285 - -
Sebi832g00011 506 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi832g00011 506 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Sebi832g00011 506 Gene3D - 325 401 - -
Sebi832g00011 506 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi832g00011 Sebi-Chr832 167356 171464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi832g00011 17 480 MAP Kinase Kinase Kinase AT5G58350 64.968 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi832g00011 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi832g00011 K08867 - gmx:100272203 851.277