Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi831g00008 ATGAAAATCAAGGGGAAAACAAACATCCCTAATAATGGCTATACTCTGATAGCCATTGTAGGAATCAAGGATCTTGTGCGCCTTAGGGTTAGGCAAGTTGTTCAAACTTGTTTAGCAGCTAAGGCTATAGCTAAAGAACGTGGTATACTAACTGAGGATGGTGTGGCCAGAGCAAATGAGGATATCATACCAAGAATTCATGTAATGGCACGAACCTTACCTCTTGACAAGCATACCTTAGTAACCAATTTAAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAATGATGCCCCTGCACTTCATGAGTCAGACATTGGGCTTGCCATGGGGATAGATGGAACCAAGGTTTGTGTCTATTAA 375 0.4187 MKIKGKTNIPNNGYTLIAIVGIKDLVRLRVRQVVQTCLAAKAIAKERGILTEDGVARANEDIIPRIHVMARTLPLDKHTLVTNLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIDGTKVCVY 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi831g00008 124 Gene3D - 57 121 IPR023214 -
Sebi831g00008 124 PANTHER CATION TRANSPORTING ATPASE 6 121 - -
Sebi831g00008 124 PRINTS P-type cation-transporting ATPase superfamily signature 95 114 - -
Sebi831g00008 124 PRINTS P-type cation-transporting ATPase superfamily signature 18 29 - -
Sebi831g00008 124 NCBIfam HAD-IC family P-type ATPase 15 115 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi831g00008 124 SUPERFAMILY HAD-like 14 121 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi831g00008 Sebi-Chr831 208726 209182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi831g00008 6 121 Primary Pumps ATPases AT3G57330 60.563 4.97e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi831g00008 K01537 - twl:120014491 153.295