Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi82g00075 ATGTTGCTCATAATTTGTTATGCCTATGCAGTGGACATGGAATCTGATGTGGAAGATCAGTTTTCAGAAGCATATGCTATTGAATTTGAAGAAGCTGGTCTTGCAATATCTGCAGCATCCCGATTACTAACAAGACTACTGGATTGTGAGCAGTTTCATCATAAAATAAATTTCTCCAATTTTATTGGTATGCTTCGTGAAATCCTCAGGTCCAATATTCCCCTCCACAACAAAGATTGGGTAGCTGCTTGCCTAGTTAAACTAAGTTCTCTCTCTGGTCACAACATGATTTTTAATCCAATCAATGTGGAAGTTACACTTTATGAGACAATCCCAAGACTTGTAGAACAGATCAAAACTTCATTCTCACCAGAAGCACAGGAAGATGCTGTTGTAGAACTTAATAGAATAATATCTGAAGGAGTGGTAGATTCCACAGAAGCTATTATTTCTGGGGGTGCAGTATATCCATTGGTGAAGCTGATTGAAGATGGCAGTGAAAGGGCTGTTGAAGCAAGCTTGGCAATACTGTATAATCTGAGTATGGACAGTGAGAACCATTCTGCACTTGTGGCCGCTGGAGCAGTCCCAGCCTTAAGAAGATTTGTTCTATCACACAGACCACTGTGGGAAAAGGCACTTCTTTTACTAAGGAGTTTGCAAATGTGA 669 0.4006 MLLIICYAYAVDMESDVEDQFSEAYAIEFEEAGLAISAASRLLTRLLDCEQFHHKINFSNFIGMLREILRSNIPLHNKDWVAACLVKLSSLSGHNMIFNPINVEVTLYETIPRLVEQIKTSFSPEAQEDAVVELNRIISEGVVDSTEAIISGGAVYPLVKLIEDGSERAVEASLAILYNLSMDSENHSALVAAGAVPALRRFVLSHRPLWEKALLLLRSLQM 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi82g00075 222 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 153 195 IPR000225 GO:0005515
Sebi82g00075 222 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 12 221 - -
Sebi82g00075 222 SUPERFAMILY ARM repeat 107 214 IPR016024 -
Sebi82g00075 222 Gene3D - 26 221 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi82g00075 Sebi-Chr82 1368511 1369179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi82g00075 111 203 U-box Gene Family AT2G28830 34.043 1.68e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi82g00075 - - gmx:100793128 327.02