Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi82g00008 ATGACTGTGGCTGGGTTGATATCTGATGTTGATGATGATCCAGCTGAGAGTGTGTGTTCTGATCCATCTTCTTCATCAGTACACCGTGACCGGATCATAATAGTGGCTAATCAGCTCCCTATAAGGGCTCAGAGGAAGCCAGATGGCAATAGGAATTGGTCTTTTGAGTGGGAGGAAAATTCACTTCTTCAATTGAAAGATGGATTGGGAGATGATGATATTGAAGTTATTTATGTTGGATGCCTTAAGGAAGATGTGCATCCAAATGATCAAGATGAGGTTTCACAGATACTTCTTGAGACCTACAAGTGTGTCCCAACTTTTCTCCCACCTGATCAGTTTACTAGGTACTATCATGGCTTTTGCAAACAACAATTGTGGCCACTGTTTCATTACATGCTTCCTTTGTCACCAGAACATGGTGGTAGGTTCAATAGGTCACTGTGGCAAGCTTATGTCTCAGTCAACAAAATTTTTGCAGATAGGATTATGGAAGTCATTAACCCTGAAGATGATTTTGTCTGGATACATGATTATCATTTGATGGTGTTACCAACTTTCTTGAGGAAGAGATTTAACAGAGTCAAACTTGGATTCTTCCTCCATAGTCCATTCCCTTCATCAGAAATATATAAAACATTGCCTGTTAGGGAAGAGCTCTTGAGAGCACTCCTTAATTCGGATTTGATTGGGTTCCATACCTTTGATTATGCGCGACATTTCCTCTCCTGTTGTAGTCGGATGCTTGGTCTCACTTATGAATCGAAGCGAGGTTATATCGGGCTTGAGTATTATGGTAGGACTGTTAGTATCAAAATTCTTCCTATTGGTATACATATGGGTCAGCTTCAATCAGTTCTAAGGCTGCCAGAGACTGAAGATAAAGTTTGTGAGCTCATTAAACAGTTTTCTGATCAAGGCAGGACAATGCTGCTTGGGGTGGATGACATGGATATTTTCAAGGGAATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTCATTCAGAATCCTGAGTATCAGGGAAAGGTAGTACTGGTCCAGATAGCTAATCCTGCCAGGGGAAAAGGGAAAGATGTGAAAGAGGTGCAAGCTGAGACAAAGGCCACCGTGAAACGGATTAATGAAACATTTGGGAAACCCGGGTATGATCCTGTTATTCTGATTGATGAGCCACTCAAGTTTTATGAGAGAGTTGCTTACTATGTTGTTGCCGAGTGTTGTTTAGTCACTGCTGTAAGGGATGGAATGAATCTCATACCATATGAATATATAATCAGTCGTCAAGGAAATGAAACATTGGATAATGTTTTAGGGCTAGTGTCCTCCCCTAAGAAGAAAAGCATGTTAGTTGTGTCTGAGTTCATTGGCTGTTCCCCATCTTTAAGTGGAGCAATCAGAGTGAACCCGTGGAATATTGATGCGGTCGCAGAAGCGATGGACTCTGCCCTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCATGAAAAGCATTATAGATATGTTAGTACTCATGATGTTGGGTACTGGGCTCGGAGCTTCTTACAAGATTTGGAAAGGAGTTGTAGTGATCATGTACGGCGAAGGTGGTGGGGAATTGGGTTTGGATTGAGTTTTAGAGTTGTAGCACTTGATCCAAACTTTAGGAAGCTCTCAATGGAACACATTGTTTCAGCTTATAAACGGACAACAACTCGAGCAATCCTTCTAGACTATGATGGTACACTAATGCCTCAGGCTTCTATTGATAAGAGCCCGACTAGTAAATCCATTGAAATTCTTAATACTTTGTGTAGAGATAAGAACAACATGGTGTTTCTTGTTAGTGCTAGAAGCCCAAAGGACCTCTCTGAATGGTTTTCTCCTTGTGAGAATCTGGGAGTTGCAGCTGAGCATGGTTACTTTATAAGAATGAAGCGAGATGCAGAATGGGAAACCTGTGTTCCTGCAACAGATTGTAGTTGGAAACAAATTGCAGAGCCTGTTATGAAACTTTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACCGCACTTGTTTGGTGCTATGAGGATGCAGATCCTGATTTTGGATCATGCCAAGCTAAGGAACTTCTTGATCATCTTGAGAGTGTGCTGGCAAATGAACCTGTAACAGTCAAAAGTGGCCAGAGTAATGTAGAGGTCAAACCACAGGGTGTGAGCAAGGGACTAGTGGCCAAACGCCTACTTTCTTCCATGGAAGAAAAGGGAATGTCACCTGATTTTGTTTTGTGCATAGGAGATGACAGGTCTGATGAAGACATGTTTGAGGTAATTACCAGTTCAATGGCCGGTCCGATTGCACCAAGGGCTGAAGTATTTGCATGCACGGTTTGTCGAAAACCCAGTAAGGCAAAGTACTATCTAGATGATACAGCTGAAATAGTGAGATTGATGCAGGGTTTAGCCTCTGTTTCAGAACAGAAAGTTTCATGTTAA 2469 0.4188 MTVAGLISDVDDDPAESVCSDPSSSSVHRDRIIIVANQLPIRAQRKPDGNRNWSFEWEENSLLQLKDGLGDDDIEVIYVGCLKEDVHPNDQDEVSQILLETYKCVPTFLPPDQFTRYYHGFCKQQLWPLFHYMLPLSPEHGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPVREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPIGIHMGQLQSVLRLPETEDKVCELIKQFSDQGRTMLLGVDDMDIFKGISLKLLAMEQLLIQNPEYQGKVVLVQIANPARGKGKDVKEVQAETKATVKRINETFGKPGYDPVILIDEPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNETLDNVLGLVSSPKKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERSCSDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPTSKSIEILNTLCRDKNNMVFLVSARSPKDLSEWFSPCENLGVAAEHGYFIRMKRDAEWETCVPATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQSNVEVKPQGVSKGLVAKRLLSSMEEKGMSPDFVLCIGDDRSDEDMFEVITSSMAGPIAPRAEVFACTVCRKPSKAKYYLDDTAEIVRLMQGLASVSEQKVSC 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi82g00008 822 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 565 682 - -
Sebi82g00008 822 NCBIfam trehalose-phosphatase 565 812 IPR003337 GO:0003824|GO:0005992
Sebi82g00008 822 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 695 822 - -
Sebi82g00008 822 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 19 813 IPR001830 GO:0003824|GO:0005992
Sebi82g00008 822 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 30 521 - -
Sebi82g00008 822 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 24 284 - -
Sebi82g00008 822 Pfam Glycosyltransferase family 20 31 519 IPR001830 GO:0003824|GO:0005992
Sebi82g00008 822 Gene3D Glycogen Phosphorylase B; 285 503 - -
Sebi82g00008 822 CDD GT20_TPS 31 519 IPR001830 GO:0003824|GO:0005992
Sebi82g00008 822 Pfam Trehalose-phosphatase 569 802 IPR003337 GO:0003824|GO:0005992
Sebi82g00008 822 CDD HAD_TPP 567 807 - -
Sebi82g00008 822 NCBIfam HAD-IIB family hydrolase 568 769 IPR006379 -
Sebi82g00008 822 Gene3D Glycogen Phosphorylase B; 23 284 - -
Sebi82g00008 822 Gene3D - 698 821 IPR023214 -
Sebi82g00008 822 Gene3D - 565 697 IPR023214 -
Sebi82g00008 822 SUPERFAMILY HAD-like 566 812 IPR036412 -
Sebi82g00008 822 FunFam Alpha,alpha-trehalose-phosphate synthase 286 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi82g00008 Sebi-Chr82 147744 150932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi82g00008 1 818 Trehalose Biosynthesis Gene Families AT1G68020 81.393 0.0 1410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi82g00008 K16055 - gmx:100818822 1527.3