Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi82g00003 ATGACAATCAGATCAACAAGTTCGAAGCGGAAGCTTCACTCCGAACCACCATCGCACATTATTAGCAAGAAGCTCCGGTCGAAGCTGCCTCGCCGGCGAAGAAGCCAGATCTCGCCGGTGCTTCTTACTTCGCCTATGTTCAAAGTTTCCGTCGAGAATCGTCGTTTATCCGTCGTTTCAGTGGACTCGAGCTCTGGCTCTGACCTGGCCGGCGGTGAAGCTTCGTGCAATTCGAGCAGAGCTTCCACCGTATTCGCTCGCATGGGAAGGTCAAACTTGAGGAACGAGTTATCAGAAGAATTTGAAGGTGTTCGGAAGGCTGAGTGTGTGGATTTCTTGAGAAATCAGAGATTTCAGAAGCGGAGTGAAAATGAACAGGAGGTATCACAGTCTTCGTGTGTGGACTCCAATTCTGGCGTTCAAGAACGCAGCAGAAGCTTAATTTTGAAGTTCAGAAGCGGAAAAGACAGTAAGAATCCGAAAGAAAATGACGAAGTTTCGGAAGCTTGCACGAAATCGGAGATTACATTCCCAGAGCAATTTTCCGTTGATAATTCAAAGTCCGGACAAGGAAATTTGAAAATCTCGTCGGAGATAACTCGAAACGACGTCGTTGCAGTTAGCTCTGGTGTTCGAAACACGTCGTTTGAAGAGGAAAAGACCAAATGCAGGGAAAACAGAGCAGCGGAATCCGAATTCTCTCAAGGTTCAAGGAACCACGGCAACTGCGCGGATTTGATTGCGCAATCGATGACAAATCATGGTTCGGATAATTCCGGCGCCGATTCCGATCTCGCTTGCAGTGAGCAATTGCTATTCTTGTACTGCGACGAAGACGACGAGTCAGAGTACTACTCCAGCCAGGGAACTGTGTTCTCTGACCTTCACTCCGAGATTTTCGGCGAATGCTCAGAGCTAGAGCTTTCAGATTATACTCCGTCTCTGTTTGTTGATTCTGGAAGCCAGTTTTCGCAAGGATCAGTTGGAGAAAATCCTTCGCCAACTTACTTACAGTTCCTTCAGTACCGCAAGGAATTCTCGACGCTAGCTTGTCCAGTTAATGCTTCAACCATAGAAGAAGATGTTTCTCTTCACTTCAAATTTGTGAGGTTCGAAGATTTGGATGACGAAGACAGCTACCAGATGCTAAGGAAGAGGGAAAGAAGGCAAGTTTTCCTGTGGAATTATGCTGAACGGTATTTCTCTACCACGGATTTCGGCGAGCTCGTGCTTCAACAACGCTCGCAAATGGTTCAGTGGATCGTTGAGCAATCTTGCCGAAAACAGCTTCGGCAAGAGACGTTGTTTCTTGGAATCAGCCTACTTGACCGTTTCCTGAGCAAAGGATACTTCAAAGCCAGACGAAACCTTCATATTGTTGGAATAGCCTGCCTCACGTTAGCCACAAGGATCGAAGAAAACCAGCCATATAACAGAGTGGGGCAAAAGTATTTCTACATAGGAAGCAGTGTGTACAGTAGATGCGAGGTGGTAGCTATGGAATGGATGGTGCAGGAGGTGCTCGAGTTCCAGTGTTTTCTGCCTACCATCTACAACTTCTTGTGGTTCTACCTAAAAGCTGCCAATGCTGATGCAGATGTGGAGAAGAGGGTCAAGTACCTAGCAGTACTGGCTCTGTCGGCTCATGAACAACTGTGCTACTGGCCCTCAACGGTTGCTGCTGCACTTGTAATATTGGCTTGTCTAGAACTCAATCAAAACGCATTCCACAAAGTCATAGGGGTAATTATCGTAGCGATACAGAGCTTAAGTCTTTATTTGAATCTTAAATGCATATGGGGTAAACATTATAGGGTATGTTTTGGTTCAATCGCAATGGAGTACTACGATATTGTTTGCACTGAAATTGTGGAAGCACTCACGTTCTGTACAATGCCTAAGTGCTAA 1908 0.4612 MTIRSTSSKRKLHSEPPSHIISKKLRSKLPRRRRSQISPVLLTSPMFKVSVENRRLSVVSVDSSSGSDLAGGEASCNSSRASTVFARMGRSNLRNELSEEFEGVRKAECVDFLRNQRFQKRSENEQEVSQSSCVDSNSGVQERSRSLILKFRSGKDSKNPKENDEVSEACTKSEITFPEQFSVDNSKSGQGNLKISSEITRNDVVAVSSGVRNTSFEEEKTKCRENRAAESEFSQGSRNHGNCADLIAQSMTNHGSDNSGADSDLACSEQLLFLYCDEDDESEYYSSQGTVFSDLHSEIFGECSELELSDYTPSLFVDSGSQFSQGSVGENPSPTYLQFLQYRKEFSTLACPVNASTIEEDVSLHFKFVRFEDLDDEDSYQMLRKRERRQVFLWNYAERYFSTTDFGELVLQQRSQMVQWIVEQSCRKQLRQETLFLGISLLDRFLSKGYFKARRNLHIVGIACLTLATRIEENQPYNRVGQKYFYIGSSVYSRCEVVAMEWMVQEVLEFQCFLPTIYNFLWFYLKAANADADVEKRVKYLAVLALSAHEQLCYWPSTVAAALVILACLELNQNAFHKVIGVIIVAIQSLSLYLNLKCIWGKHYRVCFGSIAMEYYDIVCTEIVEALTFCTMPKC 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi82g00003 635 Gene3D - 403 506 - -
Sebi82g00003 635 MobiDBLite consensus disorder prediction 120 139 - -
Sebi82g00003 635 Gene3D - 507 608 - -
Sebi82g00003 635 Pfam Cyclin, C-terminal domain 515 576 IPR004367 -
Sebi82g00003 635 SUPERFAMILY Cyclin-like 515 576 IPR036915 -
Sebi82g00003 635 PANTHER CYCLINS 357 572 IPR039361 -
Sebi82g00003 635 ProSitePatterns Cyclins signature. 414 445 IPR006671 -
Sebi82g00003 635 SMART cyclin_7 419 506 IPR013763 -
Sebi82g00003 635 MobiDBLite consensus disorder prediction 125 139 - -
Sebi82g00003 635 Pfam Cyclin, N-terminal domain 408 511 IPR006671 -
Sebi82g00003 635 SUPERFAMILY Cyclin-like 373 511 IPR036915 -
Sebi82g00003 635 SMART Cyclin_C_2 515 617 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi82g00003 Sebi-Chr82 15959 21463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi82g00003 378 574 Core Cell Cycle Gene Families AT5G11300 33.005 5.74e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi82g00003 K21777 - gmx:100817658 695.271