Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi82g00001 ATGAATCCCTTACCAAATGAAAGGGAAGAAGATTGGCTTGGTGCCCTTCTGAGGATCAAGATTGGCAATTGTGAAGAACACCAAGACCTTAAGTTCAATGAGAAGAATGTGTTCTGTGTAGACTGTGCAGTTAGCTTTTGTAGGTACTGTAAGGAAGCTCATTCCCTCCATCGAAGATTTCAGATATACAAATATTGCTATCATGATGTTGTTCGCCATTCTGATCTACACAAGTATTTTGACTGCTCAAATATTCAAACTTATATATCCAATAATGACAAGATTGTGCATCTCAAACCCCGGCCATCATCCAAAGATATCAAACTAGCAAAAAGATCTAAAGCTGCTAATAGAAGCCCTGAGTCTCAAGCCAAAGAAACCAAAACATCAACACCTCCAAAATGGGGTGGTTCTTGTGAAGAATGTGGAAGACATTTACAAGATAACCGTAATAGATTCTGCTCCATCACATGCAAGATTTCAGTGGAGCCCCAAAACCAAGGAATTGAAGAAAATTCTGTAGAGAAAAATCATTCTTCACAAAGGATTTCAGAGGAGCCTGTCAACCAAAATGACAACCAAATCTCAGAAACAGAGATATCATCTATCACTGTAGTAGCTGAGCCATATGAATGTGTTGAAAAAGTGAATTTCAGAAAGCGCCCAAGGAAATCCACCCCTCACAGAGCTCCCTTTTTTTGA 702 0.3917 MNPLPNEREEDWLGALLRIKIGNCEEHQDLKFNEKNVFCVDCAVSFCRYCKEAHSLHRRFQIYKYCYHDVVRHSDLHKYFDCSNIQTYISNNDKIVHLKPRPSSKDIKLAKRSKAANRSPESQAKETKTSTPPKWGGSCEECGRHLQDNRNRFCSITCKISVEPQNQGIEENSVEKNHSSQRISEEPVNQNDNQISETEISSITVVAEPYECVEKVNFRKRPRKSTPHRAPFF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi82g00001 233 Pfam PLATZ transcription factor 64 160 IPR006734 -
Sebi82g00001 233 MobiDBLite consensus disorder prediction 99 136 - -
Sebi82g00001 233 MobiDBLite consensus disorder prediction 169 196 - -
Sebi82g00001 233 ProSiteProfiles Zinc finger B-box type profile. 19 62 IPR000315 GO:0008270
Sebi82g00001 233 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 232 - -
Sebi82g00001 233 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi82g00001 Sebi-Chr82 2862 4557 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sebi82g00001 PLATZ 5.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi82g00001 - - gmx:100820425 317.39