Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi829g00012 ATGGGATCAAAAACTGAAGGAAAGCATTACTATTCCATGTGGCAAACCCTGTTTGAGATTGACACAAAATATGTGCCCATCAAGCCTATTGGTCGTGGAGCCTATGGAATTGTAACTTTGCGTGAACTGAAACTTCTTCGCCACCTTCACCATGAAAATGTGATTGCTTTGAAAGACATCATGATGCCTATTCATAGGAATAGTTTCAAGGATGTCTATCTGGTCTATGAACTCATGGACACCGACTTGCATCAGATTATTAAGTCTTCTCAAGCACTGTCTAATGATCACTGTCAATATTTCCTCTTTCAGTTGCTTCGGGGCTTGAAATACCTTCACTCAGCTAACATCCTTCATCGTGACTTGAAACCTGGGAATCTCCTAATCAATGCAAATTGTGACCTAAAAATATGTGATTTTGGGTTAGCACGCACTAACTGCAGCAAGAACCAGTTCATGACTGAGTATGTTGTCACTCGGTGGTATAGGGCACCAGAGCTTCTACTTTGCTGTGACAACTATGGGACTTCTATTGATGTATGGTCAGTGGGATGCATCTTTGCAGAGCTTCTTGGACGAAAACCTATTTTCCCGGGCTCAGAGTGCCTCAACCAGCTAAAACTGATTGTCAATATCCTTGGTAGTCAAAGGGAGGAGGATATTGAATTTATTGATAATCCAAAGGCAAAGAAGTATATCAAATCACTTCCATATTCTCCTGGGGCTCCCTTTTCCCGACTTTACCCCAATGCCCATCCATTAGCAATTGATCTGCTGGCAAAGATGCTTGTTTTCGATCCCACAAAGAGGATTACTGTCAATGAAGCGCTTCAACACCCTTACATGGCACCTTTGTATGATCCTAGTTGTGACCCTCCAGCTATCATTCCAATTGATCTTGAGATTGATGAGGATCTAGGGGAAGAGATGATAAGGGAGATGATGTGGAAGGAGATGCTTCATTACCATCCTGAATCTGCTATGGAAAGTGCAGAGTTGTGCTCATGA 1008 0.4236 MGSKTEGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVTLRELKLLRHLHHENVIALKDIMMPIHRNSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIVNILGSQREEDIEFIDNPKAKKYIKSLPYSPGAPFSRLYPNAHPLAIDLLAKMLVFDPTKRITVNEALQHPYMAPLYDPSCDPPAIIPIDLEIDEDLGEEMIREMMWKEMLHYHPESAMESAELCS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi829g00012 335 Pfam Protein kinase domain 39 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi829g00012 335 FunFam Mitogen-activated protein kinase 79 308 - -
Sebi829g00012 335 ProSiteProfiles Protein kinase domain profile. 1 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi829g00012 335 SUPERFAMILY Protein kinase-like (PK-like) 16 288 IPR011009 -
Sebi829g00012 335 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 303 - -
Sebi829g00012 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Sebi829g00012 335 Gene3D Phosphorylase Kinase; domain 1 39 318 - -
Sebi829g00012 335 Gene3D Transferase(Phosphotransferase) domain 1 79 308 - -
Sebi829g00012 335 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi829g00012 Sebi-Chr829 145536 147182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi829g00012 2 333 MAP Kinase Gene Family AT1G10210 78.670 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi829g00012 Pkinase 4.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi829g00012 K20535 - gmx:100798863 630.943