Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi829g00006 ATGGCATCGTCCAGTGGAAACTCCTCCAAAACTCAGAGCTCTGGCTCTGAAGAGGATTTGCAGATTCTGATGGATCAAAGGAAAAACAAGAGAAAGCAATCGAATCGTGAATCAGCAAGAAGATCTCGGATGAGAAAGCAGAATCACTTGGAAGATCTGACGAACCAGGTGTCTAAGCTCACAAAAGACAACGGTGAAATCCTCACAAACATAAACATCACAACACAGCACTATCTGAATGTTGAGGCAGAGAATTCCATTCTGAGGGCCCAGATGGGGGAACTTAATCAAAGGCTTCAATCACTAAATGATATCCTCAATTTCATTAAGACAAACACTGGACATCTTTCAGTGGTGAATTATCTCTGCCTTGGCGAATCTGAGAAGACAAGAAAAGAAAAAGTATCCATTGTTCTGGTGGTGGACTTGCTTAATTAA 438 0.4155 MASSSGNSSKTQSSGSEEDLQILMDQRKNKRKQSNRESARRSRMRKQNHLEDLTNQVSKLTKDNGEILTNINITTQHYLNVEAENSILRAQMGELNQRLQSLNDILNFIKTNTGHLSVVNYLCLGESEKTRKEKVSIVLVVDLLN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi829g00006 145 CDD bZIP_plant_GBF1 28 78 IPR045314 GO:0003700|GO:0006355
Sebi829g00006 145 SMART brlzneu 23 87 IPR004827 GO:0003700|GO:0006355
Sebi829g00006 145 MobiDBLite consensus disorder prediction 1 20 - -
Sebi829g00006 145 Coils Coil 36 70 - -
Sebi829g00006 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 30 45 IPR004827 GO:0003700|GO:0006355
Sebi829g00006 145 Gene3D - 25 81 - -
Sebi829g00006 145 Coils Coil 78 112 - -
Sebi829g00006 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 25 88 IPR004827 GO:0003700|GO:0006355
Sebi829g00006 145 SUPERFAMILY Leucine zipper domain 27 80 IPR046347 GO:0003700|GO:0006355
Sebi829g00006 145 MobiDBLite consensus disorder prediction 1 57 - -
Sebi829g00006 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 126 - -
Sebi829g00006 145 FunFam BZIP transcription factor 25 77 - -
Sebi829g00006 145 Pfam bZIP transcription factor 27 74 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi829g00006 Sebi-Chr829 38675 39198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi829g00006 23 111 bZIP Transcription Factor Family AT4G34590 68.539 1.23e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi829g00006 bZIP_1 1.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi829g00006 K25786 - rcu:8275772 159.458