Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi828g00001 ATGGCCACTTCTCTCCCCTTCACCCAATTCTACAACTCATGGTTCGACCAGTTACGCCACCTGGTCCACCAGCTATCCACGGTGCCCCGCACACCGGACCAAAACGAGGACCACCTCCTCCCCCTTGTCAACAAGGTCATGTCCCACCATGAAGACTACTTCCATGCCAAGTCAGTCGCCACTGAGAAGGACCCACTCCACGTGTTGGCCTCTCCCTGGGTCACCACCATGGAACGTTCCCTTTATTGGATCACAGGGTGGCGCCCCACCACCGCCTTCCACCTCATCTACACCGAATCCTCCCATCTCTTTGAGTCTCACATCATCGACATCCTTCGCGGCCTCCACACCGGTGACCTCGGTGATCTCTCCCCTGTTCAGTTCCAGCGAGTCAGCGAGCTGCAATGTGAAACCGTAACCAACATTCTTACCCTCCCTCTTCCTCTCATCATTTTCTTCATAAATCACTAA 471 0.5478 MATSLPFTQFYNSWFDQLRHLVHQLSTVPRTPDQNEDHLLPLVNKVMSHHEDYFHAKSVATEKDPLHVLASPWVTTMERSLYWITGWRPTTAFHLIYTESSHLFESHIIDILRGLHTGDLGDLSPVQFQRVSELQCETVTNILTLPLPLIIFFINH 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi828g00001 156 ProSiteProfiles DOG1 domain profile. 4 156 IPR025422 GO:0006351|GO:0043565
Sebi828g00001 156 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 6 140 - -
Sebi828g00001 156 Pfam Seed dormancy control 23 98 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi828g00001 Sebi-Chr828 40155 40625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi828g00001 4 111 bZIP Transcription Factor Family AT5G06950 25.000 6.46e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi828g00001 - - lja:Lj5g3v0838850.1 220.705