Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi825g00016 ATGGCTTCTTCAATTCGTCCTTCACTCTCTTCCTTCATGTTACCTTCTCTCTCTTCCTGCAACCCTTCTCAAAGGCTCTCTCTTTTTCATCTTGGTAGCGGTGTTAGACAGTACCATAATTTTGGTCTGAAAGCATCCAGATTATTGAGACATGATGGTAGCTGCATGAAAGTGATGGCATCTGGGAACCTGTCCCCAGTTGCTACCCAAGAAAGTGTACTAGATTGGGTCAAACAGGACAAGAGAAGAATGCTTCATGTTGTTTATCGTGTTGGGGACTTAGACAAGACCATAAAATTTTATACAGAGTGCCTGGGAATGAAGGTGCTCAGAAAGCGAGACATGCCAGAGGAGAGATATACCAATGCCTTTCTTGGATATGGGCCTGAGGATGCACACTTTGTTATTGAACTGACATACAATTATGGGATTGACAAGTATGACATTGGAACTGGATTTGGCCATTTTGGTATTGCTATTGATGATATTTCAAGAATAGTGGAAATTGTAAGAGCAAAGGGTGGAAAAATAATTAGAGAGCCTGCTCCTGTCAAGGGAGGCAGCTCAACAATTGCAGTTATTGAAGATCCTGATGGTTATGAATTTGAACTTTCGGAAAGGGCTCCCTCTCCTGAGCCTTTGTGTCAAGTAATGCTTCGGGTGGGTGATCTTGATCGTTCCGTAAAATTTTATGAGAAGGCTCTTGGTATGCAGCTACTTCGTACACGAGATAATCCAGAATCCAAGTGTACCATTGCAATGCTGGGTTATGGTCCAGAAGAAAAAAGTACTGTTCTGGAGTTGACTTACAACTATGGAGTCACAGAATATGATAAAGGAGATGCATATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGAGGAAAGATTACTCGGGAACCTGGACCAGTACCTGGTATCAAAACAAAAATTACATCATGTGTGGATCCTGATGGTTGGAAAACG 996 0.4197 MASSIRPSLSSFMLPSLSSCNPSQRLSLFHLGSGVRQYHNFGLKASRLLRHDGSCMKVMASGNLSPVATQESVLDWVKQDKRRMLHVVYRVGDLDKTIKFYTECLGMKVLRKRDMPEERYTNAFLGYGPEDAHFVIELTYNYGIDKYDIGTGFGHFGIAIDDISRIVEIVRAKGGKIIREPAPVKGGSSTIAVIEDPDGYEFELSERAPSPEPLCQVMLRVGDLDRSVKFYEKALGMQLLRTRDNPESKCTIAMLGYGPEEKSTVLELTYNYGVTEYDKGDAYAQIAIGTDDVYKTAEAIKLAGGKITREPGPVPGIKTKITSCVDPDGWKT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi825g00016 332 NCBIfam lactoylglutathione lyase 83 207 IPR004361 GO:0004462|GO:0046872
Sebi825g00016 332 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 83 209 IPR029068 -
Sebi825g00016 332 ProSitePatterns Glyoxalase I signature 1. 216 237 IPR018146 GO:0004462|GO:0046872
Sebi825g00016 332 CDD GlxI_Ni 214 331 - -
Sebi825g00016 332 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Sebi825g00016 332 Gene3D - 210 332 IPR029068 -
Sebi825g00016 332 PANTHER LACTOYLGLUTATHIONE LYASE 60 332 - -
Sebi825g00016 332 CDD GlxI_Ni 84 204 - -
Sebi825g00016 332 ProSitePatterns Glyoxalase I signature 2. 150 162 IPR018146 GO:0004462|GO:0046872
Sebi825g00016 332 Gene3D - 54 209 IPR029068 -
Sebi825g00016 332 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 84 204 IPR004360 -
Sebi825g00016 332 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 216 330 IPR004360 -
Sebi825g00016 332 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 214 330 IPR029068 -
Sebi825g00016 332 ProSitePatterns Glyoxalase I signature 1. 86 107 IPR018146 GO:0004462|GO:0046872
Sebi825g00016 332 FunFam Lactoylglutathione lyase 210 332 - -
Sebi825g00016 332 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 213 332 IPR037523 -
Sebi825g00016 332 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 83 207 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi825g00016 Sebi-Chr825 360820 363886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi825g00016 216 330 Calmodulin-binding Proteins AT1G08110 27.857 2.42e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi825g00016 K01759 - gmx:100781439 588.956