Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi823g00026 ATGACTGCATCATCAAATGCTAATGAGCCATCTGAGCATCCAAGTTTGAATGATACTGCTTCTGCAGTTAGTTTGGACGGGAACAATGAATTAGATGCTGCCCAAGATCCACAGGTGGATCTTGCTGGTGGTATTTTGGATGAAATTGAATCTATTATGAACATTCCTGATTATCAGAGTTCTGATGAACGCCACAGAGAGAGCAATATAGAAGTTGGTGCAGGTAATATTCGATTCAGGCCATTATTGACTAGTGATGCCTTTGTAGATATGCCATCACCAGAAGATAACAGTTCAGTGCGTTATGCAAGTCATATACGAGGCTTCGCTGATGACTCTCAACTCTTCAATTATGCTTTATTTGAATATAAAACTATTTTTCCTGAAAGTCACCAGTCTTTGTCATCTCCTTCCCTGTCTCCTGCAAGAGATGCAACTGTTGATACAAGTCTTTTCTCTCCATTGCAAAATCCTAGAAGGTCCCAGTCTCATTCATCTCTTCCCCGCCCCTTTGATGATCTTGGAAGCTTTCAGTCTAATCCAACTCGACGTCATTTTAGTTCCCCTAACTTCAATCAGAATGTATCTTCTCAGCATGATGGTGCACGTAACTTAAGAGGCTCTATACAACGGGTTAGGACACCCCCCCAAGATTTTATGGCTCGGCCTCGGTCCTCAACACGCATGGAACAATTTGTCGATGCAAGACCATATCGCCCTCTACACCAGAACCAGCCATATACAACAACCATGCATCCGTCTATAGAACACGCTCAAGAGCAAGCTTTACGAGGTAGTACTGCATATGGATATAACCAATCTTCAGCAAGCATGAACTACAACTACAACCCTCCACAAAATAGAAGAAATGAATTCCCTGTGAGCGGATTGCCTCCTGATCGAAATCTTCGACATCCCTTCTTTGATCCTTCAAATAACTTAAATCGGTTTTTACCTCCTCAGCATGATGGTGCCCGTAACATTAGAAGGTCTAATCAACAGCATGGTGCCTTTCCTCTACCACCGGAATATTATGGTCCCTTTTCTCCACCACGGGATTATGAGGCTGGCCCAAGTTCTTTGCTTATAGAAGGGGCCAGACGTTATAGTTTACAGGTACGGGGACAGCAAATTCAGCCCCCCCCACGGAATACAAGTCCTGGACATGAACTTGAGCGGCAAGGCAATATCCCAAAGTGTCTTGTGTTTAGTGAAATGGATCGAAAGCAAGAACAGGACAAGGGGAACCCGAATATGTCTGGCATTGATGTTACTCTAATATCTCCCAAAGTTCCAAAAGCAGTTTCACCAGTTTCTTCTGCAGCAGAAGGGGAAACCTTGAGGCGGCCTCGTGGCCGGCCGGCTGGCTCTAAAAACAAACCTAAGCCACCAATAATTGTCACCAGAGACAGTGCTAATGCACTCAAGGCTCATGCCATGGAAGTGAGCTCTGGCTGTGATGTGAATGAAAGTTTGTTAAACTTTGCAAGGAGAAAACAACGTGGCCTTTGCATACTTAATGGGACTGGCTGTGTAACAAATGTAACACTGCGCCAGCCAGCCTCATCTGGTGCCATTGTGACCCTTCATGGTCGTTTTGAGATTCTCTCATTGCTGGGGTCAATCCTTCCCCCACCAGCACCACCAGGGATCACAGGCCTTACAATATACTTAGCAGGTGCTCAAGGGCAAGTTGTGGGAGGTGCTGTAGTTGGTGCTTTGATTGCTTCAGGCCCAGTTATAATCATGGCTGCATCATTCATGCATGCTACTTATGATCGTCTGCCACTTGAAGATGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACCCATCATCTTGATATCTCAGACTTATATGCAATGCCACAGAATCTGCTCATGAATGGTGCAATGCCCCCAGAGATATACTCTTGGGCACCAGGGAAGAACTTGTCAAAAACCTGA 1962 0.4506 MTASSNANEPSEHPSLNDTASAVSLDGNNELDAAQDPQVDLAGGILDEIESIMNIPDYQSSDERHRESNIEVGAGNIRFRPLLTSDAFVDMPSPEDNSSVRYASHIRGFADDSQLFNYALFEYKTIFPESHQSLSSPSLSPARDATVDTSLFSPLQNPRRSQSHSSLPRPFDDLGSFQSNPTRRHFSSPNFNQNVSSQHDGARNLRGSIQRVRTPPQDFMARPRSSTRMEQFVDARPYRPLHQNQPYTTTMHPSIEHAQEQALRGSTAYGYNQSSASMNYNYNPPQNRRNEFPVSGLPPDRNLRHPFFDPSNNLNRFLPPQHDGARNIRRSNQQHGAFPLPPEYYGPFSPPRDYEAGPSSLLIEGARRYSLQVRGQQIQPPPRNTSPGHELERQGNIPKCLVFSEMDRKQEQDKGNPNMSGIDVTLISPKVPKAVSPVSSAAEGETLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILNGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVIIMAASFMHATYDRLPLEDDELAAAMQNQHYQNGRTHHLDISDLYAMPQNLLMNGAMPPEIYSWAPGKNLSKT 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi823g00026 653 CDD DUF296 478 558 IPR005175 -
Sebi823g00026 653 Pfam Plants and Prokaryotes Conserved (PCC) domain 477 587 IPR005175 -
Sebi823g00026 653 SUPERFAMILY AF0104/ALDC/Ptd012-like 472 604 - -
Sebi823g00026 653 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 418 615 IPR014476 GO:0003680
Sebi823g00026 653 FunFam AT-hook motif nuclear-localized protein 475 616 - -
Sebi823g00026 653 MobiDBLite consensus disorder prediction 1 38 - -
Sebi823g00026 653 MobiDBLite consensus disorder prediction 372 465 - -
Sebi823g00026 653 Gene3D - 476 611 - -
Sebi823g00026 653 ProSiteProfiles PPC domain profile profile. 472 610 IPR005175 -
Sebi823g00026 653 MobiDBLite consensus disorder prediction 152 201 - -
Sebi823g00026 653 MobiDBLite consensus disorder prediction 1 28 - -
Sebi823g00026 653 MobiDBLite consensus disorder prediction 283 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi823g00026 Sebi-Chr823 386598 390763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi823g00026 431 650 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 73.756 7.35e-99 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi823g00026 - - gmx:100804941 431.024