Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi823g00025 ATGATTGGCAGAGCACTGGACTCGGAGGTCTGTTTTGAAGTCCTGCGCGAAACGGGGAGGCTTCTTCACACCGCCTCTGAGGAGGAACCCAGTGAATCTTTGTTATCCTCCTTCTCCACTTTATTGTTAAATTTCTCTTCTGGAAACTCTAGAATTAAGGAGAGTCGTGACCTCATGCTTCTCTTCCCCAACGATACCCCTTCTAAACTCCCTGTTGGACGGAAGCCACTAGCATGTGTTGTTGGAGTGCCAAATCACATGACGTATTCAGATTTCTGCCAGCTCTGTGGTTCATTTATTCACCATATGCTAGAGATGTGCATTGTCAGGATGGATGGGATGGAGGATCAGTATAGTGTTTTGATTCTGTTTGATGAGCAAGAGTCTACGGACAGTTTCTACAAGCACTACAATGGCCACCGATTCTCATCTCTCGAGGTTGAGGTGTGTCGTGTTCTTCTCACATTGAATGTGTTTTTTGAGATGAATCTTGGAAATGAGAAGCCAAACTCAGTCACTTTGGTAAGCTTGCTTTCTGTTTGTATTAAAATGGTTAATATCACTGAGGGTGAGTCCATTCATTCTTACGTTATGAGGAATCACATTGAACAGAATTCTTGGAAGCATTTTCTTGTCTCAAGAACTATGGCAGAAAAAGGGGGATGCAAAACTTATGTGATGGAGAAAAAAGGAAACTGTGTCTGCAGTAAATTAAAATATGAATCTGGTGTCCATCGAGTTCAACGTGTTCCTCTAATAGAAGCACAGGACCATGTCTGTTGGCCCCCAATTAGTGGTGTTGAATGCCTTGATGGCCTCTACTTATTCTGTCAAACTTATGCTGGAGGTTCAGTTGGTGGTGATGTCAAGTTAAATGACCTAGTTTTTGTCCTCTTGTTGAGAAATATGTTGCGGATGAAGATGTCTTCTTTGTTGATTACGCCGAGGCTTATCAAAAGCTCTTTGAGCTTGGGTGATGGTGTACTTTCTCCAGCAATTTCAGTTCTAGCATCAGTATCAGGAATACAGGTTATAGAAACAAAATTCACAAATGGTGAACTTGTCCTGCTGGCCTGTGTCATATTGATTGGCCCGTTTGCTCTCCAACATTGTGACACCACAAAGTTGCATTTATTCTGTGCTATCTCCCCACACTATATCATCAAGTTCTTTATCAAGACTGGCAAAGAAGGCTGGATTTCTCTTGGAGGGATACTTCTCTGTACTACTGGAGCTGAAGCTATATACGATTACTTTGGCTATGCACAGTCATCAGGGAAGCCAAGTGAGCATAATACTTATGCTGACATTGAAGTTGTATATAAGTATCTTGAGGAGAATTATGGCGCTAAGCAAGAAGACATAATCCTTTATGGTCAATCTGTTGGAAGTGGCCCTACTTTGGATCTTGCTGCCCGTTTACCCCGTTTGAGGGTTGTTGTTCTCCATAGTCCTATACTATCAGGGTTGAGAGTCATGTACCCTGTGAAAAGAACATACTAG 1503 0.4232 MIGRALDSEVCFEVLRETGRLLHTASEEEPSESLLSSFSTLLLNFSSGNSRIKESRDLMLLFPNDTPSKLPVGRKPLACVVGVPNHMTYSDFCQLCGSFIHHMLEMCIVRMDGMEDQYSVLILFDEQESTDSFYKHYNGHRFSSLEVEVCRVLLTLNVFFEMNLGNEKPNSVTLVSLLSVCIKMVNITEGESIHSYVMRNHIEQNSWKHFLVSRTMAEKGGCKTYVMEKKGNCVCSKLKYESGVHRVQRVPLIEAQDHVCWPPISGVECLDGLYLFCQTYAGGSVGGDVKLNDLVFVLLLRNMLRMKMSSLLITPRLIKSSLSLGDGVLSPAISVLASVSGIQVIETKFTNGELVLLACVILIGPFALQHCDTTKLHLFCAISPHYIIKFFIKTGKEGWISLGGILLCTTGAEAIYDYFGYAQSSGKPSEHNTYADIEVVYKYLEENYGAKQEDIILYGQSVGSGPTLDLAARLPRLRVVVLHSPILSGLRVMYPVKRTY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi823g00025 500 Pfam PCRF domain 200 258 IPR005139 GO:0006415
Sebi823g00025 500 Gene3D - 196 260 - -
Sebi823g00025 500 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 415 499 - -
Sebi823g00025 500 SUPERFAMILY Release factor 203 256 IPR045853 -
Sebi823g00025 500 Gene3D alpha/beta hydrolase 412 498 IPR029058 -
Sebi823g00025 500 SUPERFAMILY alpha/beta-Hydrolases 415 495 IPR029058 -
Sebi823g00025 500 CDD RRM_BRAP2_like 79 158 - -
Sebi823g00025 500 Pfam BRCA1-associated protein 2 70 161 IPR011422 -
Sebi823g00025 500 Pfam K+ potassium transporter 286 379 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi823g00025 Sebi-Chr823 377029 380129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi823g00025 296 424 Inorganic Solute Cotransporters AT3G02050 41.401 6.72e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi823g00025 K10632 - gmx:100794688 212.616