Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi823g00021 ATGAGGGAATTTTTGTTACTGGGTTGGAGCTTTGTCGCTTCAGGGTTATGGCTGGTGGCTTGTCCTGCAGATTTAGCTAAGATAGACCAAGCTTGGATTGTGATCCCTAGCAGTGGTAGGACGTTTTTGGAGACTTTTGAAGTTAATTCAGCGGAGATGGATTTCTTCTCCGAATATGGCGATGCCAGCAGGTACAAAATTCAAGAAGTCATTGGGAAAGGAAGTTATGGTGTTGTTTGTTCAGCCATTGACACTCACACTGGTGAAAAGGTTGCAATAAAAAAGATTCATGATATCTTTGAGCATATATCTGATACTGCACGTATTCTCCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCACGTCATGCTTCCTCCTTCTAGGAGGGACTTCAAAGATATTTTTGTTGTTTTTGAGCTCATGGAGTCTGATCTGCACCAAGTCATTAAAGCCAATGATGACTTAACAAAAGAGCACTATCAGTTTTTCCTATACCAGTTACTTCGAGCATTGAAGTATATTCACACCGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATTTGTGATTTTGGCTTAGCTAGAGTTGCTTTCAATGACACACCATCAACTGTATTTTGGACGGATTATGTAGCTACAAGGTGGTATAGAGCACCAGAGCTCTGTGGATCATTTTACTCAAAGTATACTCCAGCAATTGATATGTGGAGTATAGGTTGCATCTTTGCTGAAGTATTAATAGGAAAACCACTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATTACAGATCTGCTTGGAACTCCCCCACTGGATACGATATCCCAGGTACGCAATGATAAGGCAAGGAGATACCTAACTAATATGAGGAAAAAGCAGCCTGTACCATTTGCACAAAGATTTCCTAAAGCAGATCCTTTATCACTACGACTATTGGAAAGGTTGCTTGCCTTTGATCCAAAAGATCGGCCTACCGCTGAAGAGGCATTAGCTTATCCTTATTTCAAGGGACTTGCAAAAATCGAGAGGGAACCATCCTGCCAGCCTATTACAAAACAGGAGTTTGAATTTGAAAGGCGGAGAGTCACAAAGGAAGAAATTCGAGAGTTAATTTTCCGTGAGATTCTAGAGTATCATCCTCAACTATTGAAAGACTGCATAAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCCGTTGATCAATTAAAAAATCAGTTTGCTCATCTTGAGGAAACTGGTGGTAAAAGTGATCCAGTTATGCCACTTGAAAGAAAACATGCATCACTTCCCAGGTCAACAATTGTACATTCAAACATGGTATCCCCAAAAGAGAAATCAAACATTGCTTCCTGCAAAAACCGGCAAACAGCTGAGGAATGTAATAATAATTCCAGAGATACAGAAAATCCTGCAACAAGGTCTATTCGGAGATTGCAAAGAATTCCATTAGGCATGTGA 1527 0.3969 MREFLLLGWSFVASGLWLVACPADLAKIDQAWIVIPSSGRTFLETFEVNSAEMDFFSEYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDTARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPSTVFWTDYVATRWYRAPELCGSFYSKYTPAIDMWSIGCIFAEVLIGKPLFPGKNVVHQLDLITDLLGTPPLDTISQVRNDKARRYLTNMRKKQPVPFAQRFPKADPLSLRLLERLLAFDPKDRPTAEEALAYPYFKGLAKIEREPSCQPITKQEFEFERRRVTKEEIRELIFREILEYHPQLLKDCINGTERTNFLYPSAVDQLKNQFAHLEETGGKSDPVMPLERKHASLPRSTIVHSNMVSPKEKSNIASCKNRQTAEECNNNSRDTENPATRSIRRLQRIPLGM 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi823g00021 508 Pfam Protein kinase domain 65 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi823g00021 508 CDD STKc_TDY_MAPK 64 401 - -
Sebi823g00021 508 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Sebi823g00021 508 ProSitePatterns Protein kinases ATP-binding region signature. 71 95 IPR017441 GO:0005524
Sebi823g00021 508 MobiDBLite consensus disorder prediction 464 494 - -
Sebi823g00021 508 FunFam Mitogen-activated protein kinase 55 159 - -
Sebi823g00021 508 ProSiteProfiles Protein kinase domain profile. 65 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi823g00021 508 MobiDBLite consensus disorder prediction 464 492 - -
Sebi823g00021 508 Gene3D Phosphorylase Kinase; domain 1 80 402 - -
Sebi823g00021 508 SUPERFAMILY Protein kinase-like (PK-like) 62 360 IPR011009 -
Sebi823g00021 508 Gene3D Transferase(Phosphotransferase) domain 1 151 379 - -
Sebi823g00021 508 SMART serkin_6 65 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi823g00021 508 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 64 402 - -
Sebi823g00021 508 FunFam Mitogen-activated protein kinase 151 379 - -
Sebi823g00021 508 ProSitePatterns MAP kinase signature. 100 203 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi823g00021 Sebi-Chr823 292279 296924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi823g00021 49 485 MAP Kinase Gene Family AT2G42880 83.753 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi823g00021 Pkinase 1.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi823g00021 - - aprc:113848523 829.706