Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi823g00009 ATGTGCATACAAGCTTTGAAAGGGAAGAAAGGGGCAAGGTTAGGTGACACAATAGTAGCATCAGTGAAAGAGGCCCATCCTAATGGGAAAATAAAGAAAGGGAAGGTTGTGTATGGGGTGGTTGTGCGTGCAGCTATGCAAAGGGGAAGATGTGATGGAAGTGAGGTCAAGTTTGATGACAATGCTGTGGTGCTTGTTGACAAGCAAGGCCAACCTATTGGGACCAGAGTTTTTGGGCCAGTGCCACATGAGCTCAGGCAAAAGAAGCATGTCAAGATTCTTACTTTGGCAGGGCATATTGCTTAA 306 0.4608 MCIQALKGKKGARLGDTIVASVKEAHPNGKIKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi823g00009 101 SMART Ribosomal_L14_2 1 101 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi823g00009 101 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 100 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi823g00009 101 Hamap 50S ribosomal protein L14 [rplN]. 1 101 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi823g00009 101 Gene3D Ribosomal protein L14 1 101 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sebi823g00009 101 ProSitePatterns Ribosomal protein L14 signature. 39 65 IPR019972 -
Sebi823g00009 101 NCBIfam 50S ribosomal protein L14 1 100 IPR005745 GO:0003735|GO:0006412|GO:0015934
Sebi823g00009 101 Pfam Ribosomal protein L14p/L23e 1 100 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi823g00009 101 SUPERFAMILY Ribosomal protein L14 1 100 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi823g00009 Sebi-Chr823 87899 88204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi823g00009 1 84 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 34.066 5.03e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi823g00009 K02874 - jre:109005836 186.422