Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi81g00143 ATGGCTGAAGATCAGTCAGTTGTTGGAAGAAGGCGTATCTACTATGATCAACATGGAAGTGAAGCACTAATATGTAGTGACAGTGAGGAAGAGATAACAGAACCTGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTATTCTATGGATGGCATTTGAGGAACATGGTTTAAATGAGGAGGTATTGATATTGTTAGCAAGTCCGTTGGAGGAGAGGTACAAAAGTATCAAGGAAAATAATATTGGTAGGTTCGACCAACATTCAGAAGGATCAGGAGAATATGAATCTCCTGTTGGCATATGTCCAGAGAAAAGCCTTAGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGGTGCCTGCAGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATCTATCCTCGTGAAAAACAGACAGTTTGGTCTGAGCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGCAGTTAAAGGCTGTCAAAAGTTTGACAGAAGATTCAACTCCAGGGTCTTATCAGGATAAGAAAACTACAATTATAGAAGAGGCAGATGGGATATTGGCACCATCCAGTGCAGAGGAACCTGATAATCAGAGTACCGCACTTCCAACAGAAGTTGATTGTCATGGATATCTCAATTTAAATGCTCCTGTCTCAGAAAATTTGGGGAAACGAAAGGTCACAGATCAATCAGACACAGAACTATGTGACTCCATATTGCCTCCTGATGATCCTCAGAATTCTTGTAAAAAGCTGAAGAGAGTCTCAGATGATGTAGGTACTGTAATTAGTGATTATAACAAGAACCTAAATTTGGGTGCATGTGATGAAAGTAAACATATAATTACTTGTGCAATTTTGGAAAAATCTGTTGAACACGCTTCAAATAAATTAATAGTTTCTTCAAGCACTTGCCATGGTGAGCATGACAAAAGTGTTGGGGATGGACCACAAGATGTCACAAATGAGACAGAAATTAAAAAGTTGTCCAATTCAATGGAAGGGCAAGTTGATGCGATGCTAAGTCTCTCGGATTGGAAACCTCTGGAGAAAGAGTTATACTTGAAGGGAGTTGAAATGTTTGGCAGAAACAGTTGCCTCATCGCAAGAAACTTACTTTCTGGTTTGAAGACTTGCGTGGAAATAGCTAGTTACATGCATGCTGGAGGAGTGTCGATGCCCCACAGATCTCTTGTTGCTCCTAGTTCAATCATGGACGACAGGGGAAAATTTGATGGAGAGTGCACAGACCAAGACATGCCATCTAGGTCACGGTTGCTGAGAAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCTTCAATATGGAAAAGAATTGCTGATGGTAAAAACCAATCTTGCAAGCAGTATACACCATGCGGATGTCAGTCAATGTGTGGAAAGGATTGTTCTTGTGTTAATGGTGGAACTTGCTGTGAAAAATATTGTGGTTGTTCAAAAAGCTGCAAAAACCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGCCCATGTTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGGCGTGGAGAAGGCCAATGCGGCAATATGAGGCTCCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCTGTTAACAAAAATGACTACCTTGGAGAGTACACAGGGGAACTAATCTCCCACAGAGAAGCTGATAAGCGTGGGAAAATATATGATCGTGCCAATTCATCTTTCCTTTTTGACTTGAATGATCAGGCATGTATCTCTCATCATCTACATTTTTCTCTTAATATAGGGTGCTCCATCTCTTCTCTAATTGATTTGAGCTTCCTTTATGTTCTTGATGCTTACCGCAAAGGAGACAAGTTGAAATTTGCGAACCACTCATCAAATCCCAACTGCTATGCAAAGGTGAGTCCAGAAGTTTTGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTCGCCAAGGAACACATTGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTACGGTCCAGATCAAGCACCCCCATGGGCTCGTAAACCTGAAGGTTCCAAGAGAGACGAATCAGCAGTTCCTCAAGGCAGAGCAAAGAAACACCAATCTCATTGA 2262 0.424 MAEDQSVVGRRRIYYDQHGSEALICSDSEEEITEPEEEKHEFSEAEDRILWMAFEEHGLNEEVLILLASPLEERYKSIKENNIGRFDQHSEGSGEYESPVGICPEKSLSAALDSFDNLFCRRCLQIFDCRLHGCSQPLIYPREKQTVWSEPEGDRKPCSDQCYLQQLKAVKSLTEDSTPGSYQDKKTTIIEEADGILAPSSAEEPDNQSTALPTEVDCHGYLNLNAPVSENLGKRKVTDQSDTELCDSILPPDDPQNSCKKLKRVSDDVGTVISDYNKNLNLGACDESKHIITCAILEKSVEHASNKLIVSSSTCHGEHDKSVGDGPQDVTNETEIKKLSNSMEGQVDAMLSLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCVEIASYMHAGGVSMPHRSLVAPSSIMDDRGKFDGECTDQDMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKDCSCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQACISHHLHFSLNIGCSISSLIDLSFLYVLDAYRKGDKLKFANHSSNPNCYAKVSPEVLVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESAVPQGRAKKHQSH 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi81g00143 753 SMART CXC_2 507 544 IPR033467 -
Sebi81g00143 753 ProSiteProfiles SET domain profile. 572 719 IPR001214 GO:0005515
Sebi81g00143 753 ProSiteProfiles CXC domain profile. 459 558 IPR026489 -
Sebi81g00143 753 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 753 IPR025778 GO:0031519
Sebi81g00143 753 CDD SET_EZH 572 720 - -
Sebi81g00143 753 MobiDBLite consensus disorder prediction 730 746 - -
Sebi81g00143 753 Pfam CXC domain 511 542 IPR041355 -
Sebi81g00143 753 MobiDBLite consensus disorder prediction 724 753 - -
Sebi81g00143 753 Gene3D SET domain 473 721 IPR046341 -
Sebi81g00143 753 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 1 634 IPR045318 GO:0006338|GO:0042054
Sebi81g00143 753 SUPERFAMILY SET domain 443 723 IPR046341 -
Sebi81g00143 753 SMART set_7 572 725 IPR001214 GO:0005515
Sebi81g00143 753 Pfam SET domain 583 718 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi81g00143 Sebi-Chr81 2019600 2027728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi81g00143 561 722 C2H2 Transcription Factor Family AT2G23740 26.380 2.64e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi81g00143 SET 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi81g00143 - - gmx:100808730 1245.34